@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_33_1490: (2018-03-12 )
MLSCTSNLSSDAAAASEPPPSPRPRTPGPPIVASASHSSMPSMAATQIVSRGGSPTPPLTTDVDIRGPFLLYGPSGRLLSRYEPSDLWGLLISEHTTLNCTYAQTTVRVGRAGGCDTVLSDPRVSSTHFTISLELEPYGNSDHRNHWRGSGVGGGDHEIPLLLRRSPEGSPVHTRGMHTNASDAIASGAGVPKSAASGGLTSSSSLCSVAAAEKGLNKDGRSDARALSETTLPGWRVSRVSLTDCSANGTYVNDVLVGRGKCCDLHYGDDISIVRVPEKKRPRRGSTTPTDLSSEEDETQQESENEVACFAQSERGAELRRGTVAAPSSSAHHVAPSSRDALAGGGAARMGTEANEEGSSPSGDDPRVTQMFTALLSTLSTEHTYVERFCFHLYHAEEVGRGGAPIIEPDTVVASQRAAAGEVEAEAERQREDNDEQDKYNDVLQQSQPELKHNLSQHKSVRFPDDPVTAFDPPPQNADSDAVDSPPASLSALQHRDRRASLSMSPIPPCALVPGDTSASAAFAPQSSANSLTLSTVVTPHSLLRPRPSIRESFIAPISLPDPEESTAPSNGSVHGSVMASTSVIRFHESIGISAALRRKAAAQRALAARRGSSTASNQANGSLGTVGAIMKDMPPDIPIRYAVLPLRHLQWGGRIGFGASGDVFMGIDVSTATVVAIKVLKGSSLFQSSQPADTTVAKAHSKTTSGRSAVPSVQDDGTILNLSNISLGNGTVTDHRASSEGWTCAPPSLASPMTVPSHRATSRQVDHTNEESIQVSEASTPLTPASAVTSSSASAHGNTSAALVNTSSTSHCHTQVQQQQQPPRPQSQDEHSAAPLLRKHLREIIFLTTLQHHRIVRFLGFQFSGEGRLCLLMEYVAGGTLQTLVKNFGVFEENVIRLYTLQILEGLEYLKRKGVVHGDLKSANILVSEQGSVKLTDFGTSRFLRACAAEEKGAGEAAGADDERPGAEVRRARRRGESREVHHAPADRARKRYHHGNSPGADAAVSEDGRGEDISVGNSEGCGECCRGGSDEDVYPDDVHSAEDNFEEDEEGEEPNEDDGSERRLLCGTPLYMSPELIRTQEPTFASDMWALGCVVYEMATGGVLPWRPVHNLSAPAVIWYIGQRGEEGDGPSMDDVYTERDRLNRASTDPSLHEAVDDSYDEEGGGHRGHSSRGGRVGRWDRTPSPMLLDLLQSTLNMNPALRPTPAELLQHPFIRNEASNAALERWHALVAANRLPATHALKQHGEEGEELMSHRTLKAEPVADIKSTLRSVRGSASRDGSQHARASLSPARTPPSPQAIEVEELDDNAPAKLGGENPPGTASRQQHPSRHPPPPLGEPMTSPSMNLLGDPCEDAEPSSVLPLPPPASQPKPQMPKAHAVQVPSVLGAGSPDSQPLICEPPRRPDIRGRRMDAPPPVISQAAASPERFPSASHGAASLPWWTPQSFSAPTKLPVSRSRASASALVGMRQVEQQAPYTMPVTQQSTSKSYLRQHQLFLKQNELERRRISFLVPQGGRQMSGRHRTEGPPILQQQQQQPLPMASAPAAAGIMPMCPPSYQYAMQQPVLEYTPGYSDYNPQVNTQTVEMRLPPGFTSQSLSAPHQQGRRQSWSIGSNRVLAGVQLQSVASSQKPLSQQLRGNKPKHSSRRERARIAPTTAAASNVSPSLHTSTRSPVISMNSSHVRGPAAADSTRESSGPVLSHTSQQFAPQQQLSMQQLHPVVGGLTMEMDNLTISSPLLSSFAASMAPLPVQDHRCVLSYSGAPMPVDQPVSKSPQAHCQGPVLALLSHPRHRHTAHAQSATTSSLGPGSGDGGGAVQQASPANAAEVEGAGNSAAQRNARRGRQGRRSALSSSSLLLHQNRLRNPRRASPLLRQQLHQMTLTSTRTCVVEHSDKQEQQQIPSLNEEAPASQQQEEPRSTKRPCAARSNGRSSSTYTAGKKRRIRTSLRVSTREAIRRQQQRRSQKQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



GOL_A_3(5O2C)
WNK3_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



1PE_A_4(4B4L)
DAPK1_HUMAN
[Raw transfer]
38 HHSearch 70.0433%-123 * C1 *4XBR - INKA1_HUMAN (first) -
45 Fugue 68.0217% 30 - C1 -2ACX - GRK6_HUMAN -
39 HHSearch 64.3529%-111 - C1 -4Y85 - M3K8_HUMAN -
42 HHSearch 63.6031% -88 - C1 -5IG1 - ? -
37 HHSearch 62.3230% -85 - C1 -3I6U - CHK2_HUMAN -
21 HHSearch 62.0432% -78 - C1 -5J5T 5.0 M4K3_HUMAN
35 HHSearch 61.5532% -54 - C1 -4GV1 4.6 AKT1_HUMAN
40 HHSearch 60.8528%-104 - C1 -5IU2 - M3K8_HUMAN -
31 HHSearch 59.6534% 0 - C- -4PDP - ? -
34 HHSearch 57.4924% -62 - C1 -4B4L 1.7 DAPK1_HUMAN
28 HHSearch 55.9024% -62 - C1 -2X0G - DAPK1_HUMAN -
33 HHSearch 55.7827% -45 - C1 -3C0I - CSKP_HUMAN -
27 HHSearch 55.6229% -32 - C1 -5O2C 3.1 WNK3_HUMAN
44 Fugue 55.6017% -12 - C1 -1KOB - ? -
36 HHSearch 55.4527% -42 - C1 -3C0G - CSKP_HUMAN -
22 HHSearch 54.6626% -33 - C1 -2Y7J - PHKG2_HUMAN -
26 HHSearch 53.5531% 0 - C- -2WEL - KCC2D_HUMAN -
23 HHSearch 52.9226% -38 - C1 -2Y7J - PHKG2_HUMAN -
32 HHSearch 51.9628% -66 - C1 -4NIF - KS6A1_HUMAN -
49 Fugue 48.4614% 6 - C1 -3C4Z - RK_BOVIN -