@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_33_2190: (2018-03-12 )
MHLLAGRYILVKQIGKGGFGAVEEYTDAITKDNVAIKTIPSRYVNQESRRLVREIDIMCFLHEAHPHVIGYFSIFATKGTAIPHHNDSNAFDDPLMSVAQTAENTAFELNVLGEHYAGLNEDERLRLHHEELMAFVAKLTKTDEFNVHIVMPLMKGDLFYFIRLLSSQSSVQRLGVTHHFLAQVAVVFAFQICFGLDYLHQCSIIHRDMKPDNVLVRLDITNPYMSTALIADMGLARDAQHSDTIYICTRYYRPPEVITSVSGGSPRIDIWSLGCIFYEMCTGQTLFTMRTALNERGEWDGAKASLQLEVVLNTIGTPAAEDIERYMPSGNAKLYLQRSAARPSQLRQLIEQNWILHTSDDEKEKWIDLITRCVAFFPEQRPTAQQLCQHQLFRNYNVFYGSNVKQYAPTPYTSSYCGSSDSTRAENKAAILALVQRALRKTMPPLNEESSDEESSSLNSSSGSASSGDNGSDDERATATQPTSINDYVSAARRCSTSLPRDSLQQPSGSHENEESGSVAEPFSALDSTSTSGAPAAPPPARQRQGYALQPFDNSTSKDYCNSFLDDDDEGDVERNRERARDTEDEECLPVFQQQRPSAFMAHYSPGSAFRHSLASLPDGPPAAAASATAAPAAQAQPEKRFAHSYSSEESGPVVEDTPPLGPSATFRDRITRRRSSAAQEEEDPKLESMMPSAFNLDNYRAGKALDVTMNEEPCIPESGSPQAMESMPADDVARLLAAYNMPLEGSNYHAMLSRAQSVPPSAMPSDPYHFISQCPIGGGVEAAMLPQQQSFHTAGSPSEANGEPRGGNDGQCGADSEVCSWAVAPPASTVPPGNGAAVEAGSDDQYDYLAGTDYYIGPTPSNVAQAAAARQPAEKHGSSPYSLKEADDMRPEQAQLRTLSHASPSPTYLPS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]



CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]
24 HHSearch 94.0131% -81 - C1 -4ZZN 6.0 MK01_HUMAN
21 HHSearch 89.0928% -89 * C1 *1J1B - GSK3B_HUMAN -
41 HHSearch 87.0431% -54 - C1 -3OZ6 - ? -
23 HHSearch 81.6829% -47 - C1 -5BYZ 8.9 MK07_HUMAN
35 HHSearch 80.0030% -83 - C1 -1UA2 - CDK7_HUMAN -
39 HHSearch 76.1728% -39 - C1 -4AZF - DYRK2_HUMAN -
26 HHSearch 72.6426% 0 - C- -3EB0 - ? -
38 HHSearch 72.2525% -49 - C1 -3N9X - ? -
19 PsiBlast_PDB 72.0528% -53 - C1 -2GTM - MK14_MOUSE -
12 PsiBlast_PDB 70.3129% -57 - C1 -4KA3 - MK14_MOUSE -
1 PsiBlast_PDB 69.9728% -44 - C1 -1BMK - MK14_HUMAN -
33 HHSearch 68.5725% 0 - C- -2WEL - KCC2D_HUMAN -
4 PsiBlast_PDB 68.0529% -54 - C1 -3P4K - MK14_MOUSE -
10 PsiBlast_PDB 67.4529% -59 - C1 -1LEW - MK14_MOUSE -
13 PsiBlast_PDB 67.4228% -47 - C1 -2OZA - MK14_MOUSE -
20 PsiBlast_PDB 67.0028% -46 - C1 -2GTN - MK14_MOUSE -
11 PsiBlast_PDB 66.9029% -52 - C1 -1LEZ - MK14_MOUSE -
8 PsiBlast_PDB 66.7929% -44 - C1 -5LAR - MK14_MOUSE -
7 PsiBlast_PDB 66.6429% -37 - C1 -4LOQ - MK14_MOUSE -
5 PsiBlast_PDB 65.0929% -38 - C1 -4LOO - MK14_MOUSE -