@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2D_HUMAN: (2018-07-13 )
MASTTTCTRFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGVKESTESSNTTIEDEDVKARKQEIIKVTEQLIEAINNGDFEAYTKICDPGLTAFEPEALGNLVEGMDFHRFYFENALSKSNKPIHTIILNPHVHLVGDDAACIAYIRLTQYMDGSGMPKTMQSEETRVWHRRDGKWQNVHFHRSGSPTVPIKPPCIPNGKENFSGGTSLWQNI

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(5HU3)
KCC2A_DROME
[Raw transfer]



AN2_A_3(5H9B)
KCC2A_DROME
[Raw transfer]



ADP_A_3(5FG8)
KCC2A_DROME
[Raw transfer]



GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]



GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]



ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]



9EJ_A_3(5VLO)
KCC2D_HUMAN
[Raw transfer]



5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]



K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]



K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]



C2V_A_3(6AYW)
KCC2D_HUMAN
[Raw transfer]



D0S_A_5(6BAB)
KCC2D_MOUSE
[Raw transfer]



D0S_B_7(6BAB)
KCC2D_MOUSE
[Raw transfer]



3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]
1 PsiBlast_PDB 92.1388% -95 - C1 -5U6Y - KCC2A_RAT -
2 PsiBlast_PDB 86.2882% -92 - C1 -3SOA 4.8 KCC2A_HUMAN
21 HHSearch 80.92100%-130 - C1 -2WEL 6.0 KCC2D_HUMAN
3 PsiBlast_PDB 80.7599%-130 - C1 -2WEL 6.0 KCC2D_HUMAN
7 PsiBlast_PDB 80.3699%-117 - C1 -2VN9 7.1 KCC2D_HUMAN
24 HHSearch 79.90100%-117 - C1 -2VN9 7.1 KCC2D_HUMAN
5 PsiBlast_PDB 79.35100%-117 - C1 -6AYW 7.7 KCC2D_HUMAN
10 PsiBlast_PDB 79.0592%-122 - C1 -2VZ6 - KCC2A_HUMAN -
26 HHSearch 78.8191%-118 - C1 -2VZ6 - KCC2A_HUMAN -
9 PsiBlast_PDB 78.5291%-123 - C1 -3BHH 6.1 KCC2B_HUMAN
4 PsiBlast_PDB 78.20100%-114 - C1 -5VLO 8.7 KCC2D_HUMAN
8 PsiBlast_PDB 77.9291%-115 - C1 -2V7O 6.7 KCC2G_HUMAN
29 HHSearch 77.6583%-130 - C1 -3KK8 - KCC2D_CAEEL -
15 PsiBlast_PDB 77.2282%-129 - C1 -3KK8 - KCC2D_CAEEL -
22 HHSearch 76.82100%-112 - C1 -6BAB 8.7 KCC2D_MOUSE
6 PsiBlast_PDB 76.26100%-110 - C1 -6BAB 9.8 KCC2D_MOUSE
11 PsiBlast_PDB 76.1780%-116 - C1 -2BDW - KCC2D_CAEEL -
23 HHSearch 76.1684%-116 - C1 -2BDW - KCC2D_CAEEL -
12 PsiBlast_PDB 75.1184%-122 - C1 -5FG8 5.0 KCC2A_DROME
14 PsiBlast_PDB 73.6784%-120 - C1 -5HU3 5.1 KCC2A_DROME
13 PsiBlast_PDB 72.9584%-118 - C1 -5H9B 5.7 KCC2A_DROME
27 HHSearch 60.0449% -37 - C1 -3C0I 5.0 CSKP_HUMAN
18 PsiBlast_PDB 59.6849% -29 - C1 -3MFR 4.0 CSKP_HUMAN
19 PsiBlast_PDB 58.9649% -28 - C1 -3MFS 5.1 CSKP_HUMAN
34 HHSearch 58.2044% -92 - C1 -2W4O 5.4 KCC4_HUMAN
37 HHSearch 50.9342% -7 - C1 -2Y7J 6.4 PHKG2_HUMAN
33 HHSearch 45.2034% 22 - C1 -4B4L 2.4 DAPK1_HUMAN