@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0276: (2017-12-19 )
MTTFKDGFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITLGVLEGKYYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPKGDELEPNEEGLQFYDNLFDECLKNGIEPVITLSHFEMPYHLVTEYGGWKNRKLIDFFARFAEVVFKRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYEEGDNREAIMYQAAHYELVASARAVKIGHEINPDFQIGCMIAMCPIYPVTCNPKDILMAMKAMQKRYYFADVHVLGKYPEHIFKYWERKGISVDFTDQDKEDLLGGTVDYIGFSYYMSFAIDSHRENNPYFDYLETEDLVKNNYVKASEWEWQIDPEGLRYALNWFTDHYHLPLFIVENGFGAIDQVAADGMVHDDYRIEYLGAHIREMKKAVVEDGVDLMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDNGKGSYNRSPKKSFGWYKEVISSNGESVE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BG6_B_7(4F66)
?
[Raw transfer]



6GB_B_5(4GPN)
?
[Raw transfer]



1FT_B_3(4IPN)
?
[Raw transfer]



BG6_A_3(4ZEP)
?
[Raw transfer]



BGP_A_3(4ZEN)
?
[Raw transfer]



BGP_B_14(4ZEN)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



GOL_A_3(4IPL)
?
[Raw transfer]



FMT_A_19(3PN8)
?
[Raw transfer]



BGC_A_2(3QOM)
?
[Raw transfer]



PEG_A_12(3PN8)
?
[Raw transfer]
22 PsiBlast_CBE 98.8286%-104 - C1 -4GPN 6.3 ?
1 PsiBlast_PDB 98.0986% -98 - C1 -4F66 - ? -
2 PsiBlast_PDB 98.0586%-103 - C1 -4F79 - ? -
3 PsiBlast_PDB 97.4686%-100 - C1 -4GPN - ? -
4 PsiBlast_PDB 97.0183% -99 - C1 -3PN8 2.8 ?
21 PsiBlast_CBE 96.6086% -98 - C1 -4F66 5.1 ?
5 PsiBlast_PDB 89.9365%-103 - C1 -3QOM 2.4 ?
6 PsiBlast_PDB 89.8765%-104 - C1 -4GZE - ? -
7 PsiBlast_PDB 89.0263% -96 - C1 -2XHY - BGLA_ECOLI -
112 HHSearch 88.4863% -85 - C1 -2XHY - BGLA_ECOLI -
111 HHSearch 87.1663% -89 - C1 -2XHY - BGLA_ECOLI -
127 HHSearch 77.1651% -76 - C1 -4IPN 3.1 ?
126 HHSearch 76.9751% -80 - C1 -4IPL - ? -
118 HHSearch 70.0939% -38 - C1 -4ZEH - ? -
12 PsiBlast_PDB 69.1537% -36 - C1 -4ZEN 2.9 ?
11 PsiBlast_PDB 68.4637% -35 - C1 -4ZEH - ? -
28 PsiBlast_CBE 68.4137% -37 - C1 -4ZEN 3.6 ?
31 PsiBlast_CBE 68.1437% -35 - C1 -4ZEH - ? -
30 PsiBlast_CBE 68.0237% -34 - C1 -4ZEH - ? -
33 PsiBlast_CBE 67.9236% -34 - C1 -4ZFM - ? -
26 PsiBlast_CBE 63.1850% 25 - C1 -4IPN 3.1 ?
8 PsiBlast_PDB 62.0850% 25 - C1 -4IPL 2.7 ?