@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0852: (2017-12-30 )
MTTHDEPVYEKHGVLHYAVANIPGAVARTSTIALTNVTLPYIEALAGKGFAQAISEDEGLRQGVTTYQGYLTSLPVAQGLNRDYTDINDLV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_8(4IZH)
?
[Raw transfer]




NAI_B_4(2VHV)
DHA_MYCTU
[Raw transfer]




NAI_A_3(2VHV)
DHA_MYCTU
[Raw transfer]




NAD_G_7(1PJC)
?
[Raw transfer]




NAD_E_8(2VOJ)
DHA_MYCTU
[Raw transfer]




NAD_C_6(2VOJ)
DHA_MYCTU
[Raw transfer]




GOL_A_4(4LMP)
?
[Raw transfer]




GOL_A_4(4LMP)
?
[Raw transfer]




2OP_C_7(2VOJ)
DHA_MYCTU
[Raw transfer]




2OP_A_5(2VOJ)
DHA_MYCTU
[Raw transfer]




2OP_E_9(2VOJ)
DHA_MYCTU
[Raw transfer]




3 PsiBlast_PDB 85.3942%-117 - C3 -4LMP 2.7 ?
24 PsiBlast_CBE 85.2342%-105 - C3 -2VHW - DHA_MYCTU -
38 HHSearch 85.0738%-144 - C3 -4LMP 2.7 ?
18 PsiBlast_CBE 84.4742%-109 - C3 -2VHX - DHA_MYCTU -
23 PsiBlast_CBE 84.3842% -99 - C3 -2VHW - DHA_MYCTU -
19 PsiBlast_CBE 84.2342%-113 - C3 -2VHX - DHA_MYCTU -
7 PsiBlast_PDB 84.0442%-109 - C3 -2VHV 2.1 DHA_MYCTU
26 PsiBlast_CBE 83.5742%-108 - C3 -2VHV 3.0 DHA_MYCTU
20 PsiBlast_CBE 83.4342%-106 - C3 -2VHX - DHA_MYCTU -
25 PsiBlast_CBE 83.2342%-108 - C3 -2VHW - DHA_MYCTU -
4 PsiBlast_PDB 83.0242%-109 - C3 -2VHW - DHA_MYCTU -
5 PsiBlast_PDB 82.7442% -96 - C3 -2VHX - DHA_MYCTU -
21 PsiBlast_CBE 82.7242%-109 - C3 -2VHW - DHA_MYCTU -
22 PsiBlast_CBE 82.3242%-117 - C3 -2VHW - DHA_MYCTU -
15 PsiBlast_CBE 82.2442%-109 - C3 -2VHZ - DHA_MYCTU -
13 PsiBlast_CBE 82.2342% -95 - C3 -2VOJ 2.8 DHA_MYCTU
6 PsiBlast_PDB 82.2342%-109 - C3 -2VHZ - DHA_MYCTU -
17 PsiBlast_CBE 82.1942%-103 - C3 -2VHX - DHA_MYCTU -
16 PsiBlast_CBE 81.5542%-107 - C3 -2VHX - DHA_MYCTU -
14 PsiBlast_CBE 81.0142% -94 - C3 -2VOJ 2.8 DHA_MYCTU
2 PsiBlast_PDB 79.7642% -99 - C3 -2VOJ 2.8 DHA_MYCTU
39 HHSearch 72.9341% -87 * C3 *1PJC 1.9 ?