@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1074: (2018-01-04 )
MILTVTMNPSIDISYPLDELKIDTVNRVVDVTKTAGGKGLNVTRVLSEFGDSVLATGLVGGKLGEFLVEHIDNQVKKDFFSIQGETRNCIAILHGDNQTEVLEKGPEVLEQEGQDFLEHFKKLLESVEVVAISGSLPAGLPVDYYASLVELANQAGKPVVLDCSGAALQAVLESPHKPTVIKPNNEELSQLLGREVSEDLDELKEVLQEPLFAGIEWIIVSLGANGTFAKHGDTFYKVDIPRIQVVNPVGSGDSTVAGISSGLLHKESDAELLIKANVLGMLNAQEKMTGHVNMANYQALYDQLIVKEV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_D_14(2JG1)
LACC_STAA8
[Raw transfer]



ANP_C_12(2JG1)
LACC_STAA8
[Raw transfer]



ANP_B_8(2JG1)
LACC_STAA8
[Raw transfer]



ANP_B_8(2JG1)
LACC_STAA8
[Raw transfer]



ATP_B_3(2F02)
LACC_ENTFA
[Raw transfer]



ADP_B_5(2JGV)
LACC_STAA8
[Raw transfer]



TA6_A_3(3JUL)
?
[Raw transfer]



GOL_A_6(3IE7)
?
[Raw transfer]



F6P_A_5(3N1C)
PFKB_ECOLI
[Raw transfer]



F6P_D_18(3UQD)
PFKB_ECOLI
[Raw transfer]



ATP_A_8(3UMO)
PFKB_ECOLI
[Raw transfer]



POP_A_6(3UQE)
PFKB_ECOLI
[Raw transfer]
43 HHSearch 85.6063% -12 - C1 -2JGV - LACC_STAA8 -
3 PsiBlast_PDB 83.9861% -7 - C1 -2JG1 - LACC_STAA8 -
1 PsiBlast_PDB 83.9862% -9 - C1 -2JGV - LACC_STAA8 -
42 HHSearch 83.9762% -11 - C1 -2JG1 7.8 LACC_STAA8
21 PsiBlast_CBE 83.3962% -10 - C1 -2JGV 5.4 LACC_STAA8
22 PsiBlast_CBE 83.0461% -8 - C1 -2JG1 7.9 LACC_STAA8
24 PsiBlast_CBE 82.2361% -8 - C1 -2JG1 7.8 LACC_STAA8
23 PsiBlast_CBE 81.7161% 2 - C1 -2JG1 8.1 LACC_STAA8
2 PsiBlast_PDB 80.8962% -7 - C- -2Q5R - LACC_STAAC -
46 HHSearch 77.0953% -4 - C1 -2F02 5.7 LACC_ENTFA
47 HHSearch 75.9853% -1 - C1 -2F02 - LACC_ENTFA -
4 PsiBlast_PDB 75.9551% -4 - C1 -2AWD - LACC_ENTFA -
5 PsiBlast_PDB 75.3351% -6 - C1 -2F02 - LACC_ENTFA -
49 HHSearch 63.5332% -10 * C1 *2ABQ - ? -
44 HHSearch 62.0131% -16 - C1 -2JG5 - ? -
6 PsiBlast_PDB 58.7335% -25 - C1 -2JG5 - ? -
52 HHSearch 57.3727% 8 - C1 -2AJR - ? -
11 PsiBlast_PDB 56.9631% -11 - C1 -3IE7 2.4 ?
50 HHSearch 56.8727% 16 - C1 -3UMO 2.4 PFKB_ECOLI
17 PsiBlast_PDB 56.8727% 12 - C1 -3UQD - PFKB_ECOLI -