@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr2000: (2018-01-24 )
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPFSRRLQILFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKALRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGKTALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDSTLDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVETAVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSDLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDILTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDP

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_3(4CIU)
CLPB_ECOLI
[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]
128 Fugue 98.7945% 0 - C- -1QVR - CLPB_THET8 -
102 HHSearch 73.7445% -19 - C5 -3J3U - CLPC_BACSU -
103 HHSearch 71.7444% - * C5 *3PXI - CLPC_BACSU -
5 PsiBlast_PDB 70.9741% - - C5 -3PXI - CLPC_BACSU -
3 PsiBlast_PDB 69.0544% 16 - C5 -3J3R - CLPC_BACSU -
4 PsiBlast_PDB 68.9144% 18 - C5 -3J3U - CLPC_BACSU -
1 PsiBlast_PDB 67.3944% 27 - C5 -3J3S - CLPC_BACSU -
2 PsiBlast_PDB 65.2344% 25 - C3 -3J3T - CLPC_BACSU -
15 PsiBlast_PDB 64.2152%-136 - C3 -4CIU 5.8 CLPB_ECOLI
23 PsiBlast_CBE 63.6157%-142 - C3 -4LJ7 6.5
24 PsiBlast_CBE 63.5357%-136 - C3 -4LJ7 5.4 CLPB_THET8
19 PsiBlast_PDB 63.4057%-136 - C3 -4FCW 5.8 CLPB_THET8
9 PsiBlast_PDB 63.2257%-135 - C3 -4LJ7 7.1 CLPB_THET8
111 HHSearch 62.6059%-133 - C3 -4FCV 6.0 CLPB_THET8
17 PsiBlast_PDB 61.2657%-139 - C3 -4FD2 5.7 CLPB_THET8
18 PsiBlast_PDB 61.2057%-134 - C3 -4FCV 6.0 CLPB_THET8
8 PsiBlast_PDB 61.0457%-128 - C3 -4LJ5 5.9
110 HHSearch 60.9058%-112 - C3 -4LJ9 5.8
26 PsiBlast_CBE 60.8857%-139 - C3 -4FD2 5.5 CLPB_THET8
7 PsiBlast_PDB 60.8357%-129 - C3 -4LJ4 - -
25 PsiBlast_CBE 60.6857%-139 - C3 -4FD2 5.3
10 PsiBlast_PDB 60.4257%-112 - C3 -4LJ9 5.8
11 PsiBlast_PDB 60.2657%-124 - C3 -4LJA 6.2