@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL78: (2017-10-31 )
MNSQTKTNPETQVPYDVKHLHDLLEQQKIAYLRHPVPTAKERIDRLARLKRVLVKYQDQIAEAINLDYGNRAIMETKIGELLTCLEQIKYYSKNLTGWMKPSKRHISVLHQPAKGWVQYQPMGVIGIITPWNYPLLLSVGPLICALAAGNHAMIKISSASPNFGQVLENALSEAFPQELVAVVNGGGVISDTFSHLPFDKMIFTGSTSVGKTVMAAAAQNLVPVILELGGKSPALVHASVDMKDVAQRIAVGKLWNAGQTCVAPDHIFLPRDKTAEFIENFKLIVAGMYPHFRNNQDYTSIINDKQYNRIQGYLENARDQGARIIEINPQNEILDDVRKIAPTLVTGVTTAMDIMQNEIFGPVLPILEYDQIEEVIEFINSRPRPLAMYYFDYDQARADYISQHTHSGHFGINMVITHVAQDDLPFGGIGASGMGKYHGPEGFFGLSHERSVMSNPKLYSLKYILPPFNKPIHRFISKTLLR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_H_(1O01)
ALDH2_HUMAN
[Raw transfer]




35 PsiBlast_CBE 92.5733%-109 - C4 -5UCD - MDLD_PSEPU -
161 HHSearch 92.2834% -87 - C4 -3SZA - AL3A1_HUMAN -
8 PsiBlast_PDB 92.1833%-107 - C4 -5UCD - MDLD_PSEPU -
154 HHSearch 90.0934% -53 - C4 -5MYP - ? -
28 PsiBlast_CBE 88.5935% -87 - C4 -4H80 - AL3A1_HUMAN -
30 PsiBlast_CBE 88.1835% -87 - C4 -4H80 - AL3A1_HUMAN -
33 PsiBlast_CBE 88.0235% -85 - C4 -3SZB - AL3A1_HUMAN -
29 PsiBlast_CBE 87.8035% -87 - C4 -4H80 - AL3A1_HUMAN -
25 PsiBlast_CBE 87.7235% -84 - C4 -4L1O - AL3A1_HUMAN -
3 PsiBlast_PDB 87.7035% -84 - C4 -3SZA - AL3A1_HUMAN -
24 PsiBlast_CBE 87.6835% -86 - C4 -4L2O - AL3A1_HUMAN -
6 PsiBlast_PDB 87.4035% -86 - C4 -4L2O - AL3A1_HUMAN -
26 PsiBlast_CBE 87.1835% -87 - C4 -4H80 - AL3A1_HUMAN -
27 PsiBlast_CBE 87.1735% -86 - C4 -4H80 - AL3A1_HUMAN -
32 PsiBlast_CBE 87.1035% -88 - C4 -4H80 - AL3A1_HUMAN -
5 PsiBlast_PDB 87.0935% -86 - C4 -4H80 - AL3A1_HUMAN -
31 PsiBlast_CBE 87.0035% -86 - C4 -4H80 - AL3A1_HUMAN -
22 PsiBlast_CBE 86.9835% -85 - C4 -4L2O - AL3A1_HUMAN -
23 PsiBlast_CBE 86.7535% -85 - C4 -4L2O - AL3A1_HUMAN -
21 PsiBlast_CBE 86.7233% -54 - C4 -1AD3 - AL3A1_RAT -