@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLJ4: (2017-11-03 )
MQRCLMDSKTTKLPAYSETLSIEGMTCASCVGRVEKALKKVENVEIANVNLATEKAVVYSNQPIQREALVKAVERAGYDVPKAAPVELSIEGMTCASCVARVEKALKKVEGVQNTTVNLATEQAWVQADPSVNVEDLIRAVKKAGYDAKASEKNQDEQLDKKASELDQLKKDLIISIVLALPVFILEMCSHLIPAFHMWVMHTIGQYNSWLLQFVLTTLVLVFPGRRFYQKGIPALWRLAPDMNSLVAVGTLAAYSFSVVATFMPQVLPEGTVNVYFEAAAVIVSLILLGRYFEAKAKGRTSQAIQHLVGMQPKTARIQRNGQIVEVAVAEVVSGTIVEIRPGERVPVDGEVVEGHSYIDESMITGEPVPVEKIIGQQVVGGTVNQNGTLNIRATAVGSSSVLSQIIRMVEQAQGSKLPIQGLVDKVTMWFVPAVMLIAAITFLVWFIWGPEPALTFGLVNAVAVLIIACPCAMGLATPTSIMVGTGRGAELGVLFRKGEALQLLQEAQVVAVDKTGTLTEGKPTLTDFNVQSGFERNQVLTLVASVEAKSEHPIALAIVQAAESEGLNLLPVTAFNSITGSGIEAEVSGQKVQIGADRYMHELRLDTSSFQAIAAQLGEEGKTPLYVAIDQQLAAIIAVADPIKETTYAAIEALHQLGLKVAMITGDNRHTAQAIAKKLNIDEVVAEVLPEGKVDTVRQLQKQYGRLAFVGDGINDAPALAQADVGLAIGTGTDVAIEAADVVLMSGSLKGVPNAIALSKATMRNIRQNLFWAFVYNVALIPIAAGALYPAFGVLLSPMFAAGAMALSSVFVLGNALRLKRFHAPVH

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_B_5(3A1C)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



ACP_B_5(3A1E)

[Raw transfer]



ACP_A_3(3A1E)
COPA_ARCFU
[Raw transfer]



ADP_B_5(3A1D)
?
[Raw transfer]



ADP_A_3(3A1D)
?
[Raw transfer]



MGF_A_3(4BEV)
COPA_LEGPH
[Raw transfer]
51 Fugue 75.9848% -27 - C1 -3RFU - COPA_LEGPH -
1 PsiBlast_PDB 74.7547% -26 - C1 -3RFU - COPA_LEGPH -
2 PsiBlast_PDB 74.2147% -24 - C1 -4BEV 2.4 COPA_LEGPH
3 PsiBlast_PDB 74.0347% -25 - C1 -4BYG - COPA_LEGPH -
4 PsiBlast_PDB 72.6043% -9 - C1 -3J09 - COPA_ARCFU -
52 Fugue 71.4032%-103 - C1 -4UMW - ZNTA_SHISS -
5 PsiBlast_PDB 70.6245% -75 - C1 -3J08 - COPA_ARCFU -
62 HHSearch 63.8732% -34 - C1 -4UMW - ZNTA_SHISS -
7 PsiBlast_PDB 63.8532% -23 - C1 -4UMW - ZNTA_SHISS -
6 PsiBlast_PDB 60.7032% -19 - C1 -4UMV - ZNTA_SHISS -
65 HHSearch 54.5022% -16 - C1 -2ZXE - ? -
73 HHSearch 54.0840%-113 - C1 -3SKX - -
11 PsiBlast_PDB 53.6541%-114 - C1 -3SKX - -
12 PsiBlast_PDB 53.4442%-114 - C1 -3SKY - -
74 HHSearch 52.8241%-112 - C1 -3SKY - -
24 PsiBlast_CBE 49.1044% -37 - C1 -3A1D 5.3 ?
25 PsiBlast_CBE 48.6144% -38 - C1 -3A1C 6.8 ?
20 PsiBlast_PDB 48.4030% -99 - C1 -2YJ4 - ? -
26 PsiBlast_CBE 48.3944% -37 - C1 -3A1E 6.0
10 PsiBlast_PDB 47.9844% -35 - C1 -3A1E 5.2 COPA_ARCFU
8 PsiBlast_PDB 47.9344% -37 - C1 -3A1C 6.2 ?