@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLK2: (2017-11-03 )
MRYRIHYIDVQNALQNYIWILEDTETHEAVAVDPTEAELVTHFCQEHQLTLKQIWLTHWHKDHIGGVADLTANTPMAVYGPRDELSKIPGITHPLQHDDHLKFNDLKVEIIATPGHTLGHIVYFIEELNALFCGDTLFAMGCGRLFEGTAEQMYHSLNRLAALPTATKVYCTHEYTLSNAEFALSVEPENHALQERAEQVRMLRQEGKITLPSSIELELATNPFLRAESVDEFAHLRSLKDNF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_A_7(1XM8)
GLO2N_ARATH
[Raw transfer]



SPD_A_4(2P18)
?
[Raw transfer]



ACY_A_7(1XM8)
GLO2N_ARATH
[Raw transfer]



SPD_A_4(2P1E)
?
[Raw transfer]



ACY_B_9(1XM8)
GLO2N_ARATH
[Raw transfer]



ACY_B_9(2Q42)
GLO2N_ARATH
[Raw transfer]



ACY_A_7(2Q42)
GLO2N_ARATH
[Raw transfer]
158 HHSearch 84.2945% -67 - C1 -2QED - GLO2_SALTY -
3 PsiBlast_PDB 83.7544% -68 - C1 -2QED - GLO2_SALTY -
156 HHSearch 83.3241% -90 - C1 -1XM8 2.4 GLO2N_ARATH
146 Fugue 78.2237% -65 - C1 -1QH5 - GLO2_HUMAN -
157 HHSearch 77.1040% -23 - C1 -1QH5 - GLO2_HUMAN -
22 PsiBlast_CBE 76.2442% -95 - C1 -1XM8 3.2 GLO2N_ARATH
1 PsiBlast_PDB 76.1342% -95 - C1 -1XM8 3.2 GLO2N_ARATH
2 PsiBlast_PDB 73.3642% -89 - C1 -2Q42 3.2 GLO2N_ARATH
21 PsiBlast_CBE 72.5742% -93 - C1 -2Q42 3.2 GLO2N_ARATH
5 PsiBlast_PDB 68.6640% -28 - C1 -1QH5 - GLO2_HUMAN -
4 PsiBlast_PDB 68.6640% -31 - C1 -1QH3 - GLO2_HUMAN -
147 Fugue 67.3337% 9 - C1 -1QH5 - GLO2_HUMAN -
6 PsiBlast_PDB 57.8829% -5 - C1 -2P18 2.1 ?
163 HHSearch 56.6529% -34 * C1 *2XF4 - ? -
7 PsiBlast_PDB 55.8829% 24 - C1 -2P1E 2.4 ?
160 HHSearch 54.1929% -9 - C1 -2P18 - ? -
15 PsiBlast_PDB 52.6629% -45 - C1 -2ZWR - ? -
16 PsiBlast_PDB 52.0429% -38 - C1 -2ZZI - ? -
168 HHSearch 51.7824% -59 - C1 -5HIQ - Y1000_PSEAE -
19 PsiBlast_PDB 51.1524% -28 - C1 -4YSK - ? -