@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLP8: (2017-11-03 )
MLKQLKEDIQAVFARDPAARNTLEVLTTYPGIHALLLHRLAHELWKKDCKGTARFVSSFSRFATGIEIHPGAKIGKRFFIDHGMGVVIGETAEIGDDVTLYHGVTLGGTTWNKGKRHPTLEDGVVVGAGAKILGPFTVGKGAKVGSNAVVTKAVPAGVTAVGNPARYIYKDADKTKDKDEERRRDYAQSIGFAPYATTADQSDPILEGMRVLLDRVQHNETRMNNLCQRLSELDPTFKKESQDEQPFSDEELKILEEIRRECGAQNKTSKT

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CYS_B_8(4H7O)
?
[Raw transfer]




CYS_A_6(4H7O)
?
[Raw transfer]




CYS_B_8(4H7O)
?
[Raw transfer]




CYS_B_4(1T3D)
CYSE_ECOLI
[Raw transfer]




SER_B_5(4N69)
?
[Raw transfer]




SER_B_5(4N69)
?
[Raw transfer]




SER_A_2(3Q1X)
?
[Raw transfer]




SER_A_2(3Q1X)
?
[Raw transfer]




CYS_A_2(3P47)
?
[Raw transfer]




COA_I_9(1SST)
CYSE_HAEIN
[Raw transfer]




COA_G_7(1SST)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




156 Fugue 82.5548% 2 - C2 -3F1X - ? -
155 Fugue 82.2544% -4 - C2 -1SSQ 3.7 CYSE_HAEIN
134 HHSearch 76.7345%-112 - C2 -1SSQ 3.7 CYSE_HAEIN
6 PsiBlast_PDB 75.9046%-118 - C2 -1S80 - CYSE_HAEIN -
10 PsiBlast_PDB 75.8046%-121 - C2 -1SSM - CYSE_HAEIN -
1 PsiBlast_PDB 75.5046%-117 - C2 -4HZD - ? -
143 HHSearch 75.3646%-111 - C2 -4HZD - ? -
2 PsiBlast_PDB 74.9446%-115 - C2 -4HZC - ? -
4 PsiBlast_PDB 74.8946%-113 - C2 -1SSQ 3.7 CYSE_HAEIN
45 PsiBlast_CBE 74.5846%-117 - C2 -1SST 3.4 CYSE_HAEIN
44 PsiBlast_CBE 74.0646%-115 - C2 -1SSQ 3.6 CYSE_HAEIN
21 PsiBlast_CBE 73.6046%-115 - C2 -4HZD - ? -
5 PsiBlast_PDB 73.5246%-127 - C2 -1SST - CYSE_HAEIN -
46 PsiBlast_CBE 73.4746%-123 - C2 -1SST 2.8 CYSE_HAEIN
135 HHSearch 73.3344%-114 - C2 -4H7O 2.7 ?
144 HHSearch 72.8246%-135 - C2 -3F1X - ? -
142 HHSearch 72.6646%-108 - C2 -4HZD - ? -
51 PsiBlast_CBE 72.5745%-135 - C2 -4N6B - ? -
136 HHSearch 72.3745%-116 - C2 -3GVD - ? -
12 PsiBlast_PDB 71.6544% -83 * C2 *4H7O - ? -
13 PsiBlast_PDB 71.5245%-121 - C2 -1T3D 3.5 CYSE_ECOLI
141 HHSearch 71.3139%-125 - C2 -3P47 2.9 ?
54 PsiBlast_CBE 71.0644% -85 - C2 -4H7O 2.7 ?
55 PsiBlast_CBE 70.9844% -82 - C2 -4H7O 2.9 ?
140 HHSearch 70.6939%-124 - C2 -3Q1X 2.5 ?
139 HHSearch 70.6745%-121 - C2 -4N69 3.5 ?
53 PsiBlast_CBE 68.5445%-126 - C2 -4N69 3.5 ?