@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLS0: (2017-11-04 )
MDNLNSPEQSDLSWLTIWSTFLNQAPFTAQTQAPEAACFLQQLIEASLQGDSCIDISPEQIETLGQLVISAEQAKSQVAPCVHDGQGLALYRYWNLEQRLAEQIRRLKQQPIQPVSCEEHLDLLTDPHQRTALQMVTRQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGKAAQRMQEALQNSFNDPKLLESGLMSDELRNQSTQTIHRLLGMGHSQTPRFNQKQPLPYDVIVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIEALSENRVHLQTSRRFAEGALIGQVARFIQMQTSQIDHEQVLQQFEIDIVQVSELRSIPLEADMPDVVQLEYLPEESPIALETYYQKLMVGFQGYVQSLKAYLQDDHSLEHIENIVKSFDDYRILTAVRHGPFGLQQLNQYAERWLQQQLGIVTLGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQPQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELIYTAITRAKKVVSLLVDPEALLQSFTVRTTRKSGLVEKVNRLVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_6(3GPL)
RECDL_DEIRA
[Raw transfer]



ADP_E_6(2XZO)
RENT1_HUMAN
[Raw transfer]



ANP_B_8(3GPL)
RECDL_DEIRA
[Raw transfer]



ADP_A_6(2XZL)
NAM7_YEAST
[Raw transfer]
35 HHSearch 73.6434% 18 - C1 -5LD2 - RECD_ECOLI -
3 PsiBlast_PDB 63.9435% 13 - C1 -5LD2 - RECD_ECOLI -
4 PsiBlast_PDB 63.5635% 8 - C1 -5MBV - RECD_ECOLI -
36 HHSearch 61.1134% 11 - C1 -1W36 - RECD_ECOLI -
26 Fugue 60.8026% 1 - C1 -3E1S - RECDL_DEIRA -
38 HHSearch 57.8328% -5 - C1 -3GP8 - RECDL_DEIRA -
2 PsiBlast_PDB 57.8334% 11 - C1 -3K70 - RECD_ECOLI -
1 PsiBlast_PDB 55.5334% 9 - C1 -1W36 - RECD_ECOLI -
27 Fugue 55.3326% 7 - C1 -1W36 - RECD_ECOLI -
43 HHSearch 44.0524% -70 - C1 -2XZL 6.4 NAM7_YEAST
7 PsiBlast_PDB 43.9134% -10 - C1 -3GPL 5.3 RECDL_DEIRA
21 PsiBlast_CBE 43.2334% -8 - C1 -3GPL 5.0 RECDL_DEIRA
6 PsiBlast_PDB 42.5434% -11 - C1 -3GP8 - RECDL_DEIRA -
40 HHSearch 41.7220% -22 - C1 -5FTB - ? -
5 PsiBlast_PDB 41.2634% -10 - C1 -3E1S - RECDL_DEIRA -
39 HHSearch 41.2021% 3 - C1 -3UPU - DDA_BPT4 -
44 HHSearch 41.0121% -77 - C1 -2XZP - RENT1_HUMAN -
13 PsiBlast_PDB 40.9034%-124 - C1 -2WJV - RENT1_HUMAN -
24 PsiBlast_CBE 40.6534%-142 - C1 -2GK6 - -
42 HHSearch 40.6020% -28 - C1 -5FTF - ? -