@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM27: (2017-11-05 )
MNIAQALAIRGEPDSYERQENAWLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPKNANIVDLGTGTGAIALALASERPDWFVTATDIYAPTLEVAKENAQTHGLHHVKFACGVWYEALEPQQFDLIVSNPPYIDPEDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEIRTIQDYGRNDRVTLASLLIK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MEQ_B_6(1NV8)
PRMC_THEMA
[Raw transfer]




GLN_A_7(1SG9)
PRMC_THEMA
[Raw transfer]




SAH_C_3(2B3T)
PRMC_ECOLI
[Raw transfer]




SAH_C_3(2B3T)
PRMC_ECOLI
[Raw transfer]




GLN_B_8(1SG9)
PRMC_THEMA
[Raw transfer]




SAH_B_2(1T43)
PRMC_ECOLI
[Raw transfer]




SAH_B_2(1T43)
PRMC_ECOLI
[Raw transfer]




MEQ_A_5(1NV8)
PRMC_THEMA
[Raw transfer]




69 HHSearch 81.7945% -61 * C2 *2B3T 5.5 PRMC_ECOLI
2 PsiBlast_PDB 71.8446% -11 - C2 -2B3T 5.5 PRMC_ECOLI
91 Fugue 71.3842% 4 - C2 -1T43 6.0 PRMC_ECOLI
1 PsiBlast_PDB 69.7146% -11 - C2 -1T43 6.0 PRMC_ECOLI
70 HHSearch 59.5528% 1 - C2 -1SG9 - PRMC_THEMA -
71 HHSearch 58.3128% -6 - C2 -1NV8 - PRMC_THEMA -
92 Fugue 57.7626% 23 - C2 -1NV9 - PRMC_THEMA -
17 PsiBlast_PDB 51.3332% -82 - C2 -1UFK - PRMA_THET8 -
34 PsiBlast_CBE 50.3832% -85 - C2 -3CJQ - PRMA_THET8 -
16 PsiBlast_PDB 50.1632% -78 - C2 -3CJT - PRMA_THET8 -
12 PsiBlast_PDB 49.6726%-124 - C2 -2YXD - CBIT_METJA -
36 PsiBlast_CBE 49.6332% -83 - C2 -3CJQ - PRMA_THET8 -
33 PsiBlast_CBE 49.5632% -88 - C2 -3CJR - PRMA_THET8 -
32 PsiBlast_CBE 49.5232% -82 - C2 -3EGV - PRMA_THET8 -
37 PsiBlast_CBE 48.8532% -79 - C2 -2ZBR - PRMA_THET8 -
5 PsiBlast_PDB 48.6331% -31 - C2 -1NV9 - PRMC_THEMA -
18 PsiBlast_PDB 48.6132% -84 - C2 -2NXE - PRMA_THET8 -
20 PsiBlast_PDB 48.3132% -86 - C2 -2NXN - PRMA_THET8 -
93 Fugue 48.0017% -50 - C2 -2H00 - MET16_HUMAN -
35 PsiBlast_CBE 47.6832% -79 - C2 -3CJQ - PRMA_THET8 -
23 PsiBlast_CBE 45.4031% -23 - C2 -1SG9 2.3 PRMC_THEMA
4 PsiBlast_PDB 44.8531% -35 - C2 -1NV8 2.2 PRMC_THEMA
6 PsiBlast_PDB 44.5431% -24 - C2 -1SG9 2.8 PRMC_THEMA