@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM81: (2017-11-06 )
MAFKNIADQTNGFYIPCVSLFGPGCAKEIGTKAQNLGAKKALIVTDEGLFKFGVADLIASYLTEAGVASHIFPGAEPNPTDINVHNGVNAYNENGCDFIVSLGGGSSHDCAKGIGLVTAGGGHIRDYEGIDKSKVPMTPLIAVNTTAGTASEMTRFCIITNTDTHVKMAIVDWRCTPLIAIDDPKLMIAKPAGLTAATGMDALTHAVEAYVSTAANPITDACAEKAITMISQWLQPAVANGENIEARDAMSYAQYLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAILLPHVCEFNLIACPDRYAKIAELMGVNTHGLTVTEAAYAAIDAIRKLSSSIGIPSGLTELGVKTEDLAVMAENAQKDACMLTNPRKANHAQVVEIFKAAL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_7(2BL4)
FUCO_ECOLI
[Raw transfer]



NAD_A_4(2BI4)
FUCO_ECOLI
[Raw transfer]



NAD_B_7(2BI4)
FUCO_ECOLI
[Raw transfer]



NAD_A_4(2BL4)
FUCO_ECOLI
[Raw transfer]



APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]



APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]



GOL_B_11(5BR4)
FUCO_ECOLI
[Raw transfer]



GOL_A_5(5BR4)
FUCO_ECOLI
[Raw transfer]
40 PsiBlast_CBE 97.1256%-105 - C4 -3OX4 - ADH2_ZYMMO -
42 PsiBlast_CBE 96.7156%-107 - C4 -3OX4 - ADH2_ZYMMO -
3 PsiBlast_PDB 96.4556%-106 - C4 -3OX4 - ADH2_ZYMMO -
41 PsiBlast_CBE 96.4356%-104 - C4 -3OX4 - ADH2_ZYMMO -
60 HHSearch 96.1755%-104 - C4 -3BFJ - DHAT_KLEPN -
2 PsiBlast_PDB 96.1456%-110 - C4 -3OWO - ADH2_ZYMMO -
59 HHSearch 95.2155% -99 - C4 -3OX4 - ADH2_ZYMMO -
1 PsiBlast_PDB 86.3455% -36 - C4 -3BFJ - DHAT_KLEPN -
4 PsiBlast_PDB 80.0650% -28 - C4 -4FR2 - ? -
63 HHSearch 74.8340% -43 - C4 -5BR4 - FUCO_ECOLI -
62 HHSearch 74.7949% -5 - C4 -4FR2 - ? -
61 HHSearch 74.1339% -44 - C4 -1RRM 8.6 FUCO_ECOLI
8 PsiBlast_PDB 72.3338% -43 - C4 -1RRM 8.6 FUCO_ECOLI
5 PsiBlast_PDB 72.1039% -43 - C4 -2BI4 6.5 FUCO_ECOLI
48 PsiBlast_CBE 72.0039% -41 - C4 -5BR4 2.8 FUCO_ECOLI
7 PsiBlast_PDB 71.9439% -43 - C4 -5BR4 2.8 FUCO_ECOLI
46 PsiBlast_CBE 71.7539% -43 - C4 -2BL4 8.8 FUCO_ECOLI
47 PsiBlast_CBE 71.5239% -45 - C4 -2BI4 6.8 FUCO_ECOLI
6 PsiBlast_PDB 71.3339% -40 - C4 -2BL4 8.2 FUCO_ECOLI
49 Fugue 63.3823% -63 - C4 -1OJ7 - YQHD_ECOLI -