@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VME1: (2017-11-07 )
MTVKNSPAELSSALVNQRNDVPLIRYSGRFAPSPTGPLHFGSLITAVASYCDARAHQGRWLVRVEDTDIPRIYPGSEDHILASLEAFQFDPDAEIIFQKDRLDIYESVLDQLKKEGLVYACQCTRKMLGSNAIYAGTCRDLQLDFQHQAIRVKVQDQPICFDDRLQGLHCSNLEHDLGDFVLKRRDGIINYQLAVVADDYLQGITHVVRGADLLDNTERQIWLGQLLGYPKLSYMHLPLAMNDQGQKLSKQNLAHALDLTKAPELLQQAIQALGQPQVDLARPEVMLKQAVTQWNVDLIPHGQQLCGTYL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSU_A_2(3AFH)
SYE2_THEMA
[Raw transfer]



GLU_B_7(4GRI)
SYE_BORBU
[Raw transfer]



GLU_A_4(4GRI)
SYE_BORBU
[Raw transfer]



GLU_A_2(4A91)
GLUQ_ECOLI
[Raw transfer]



GLU_B_7(4GRI)
SYE_BORBU
[Raw transfer]



GLU_A_4(4GRI)
SYE_BORBU
[Raw transfer]



GOL_B_11(5TGT)
SYE_PSEAE
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]



GLU_B_2(2CUZ)
SYE_THET8
[Raw transfer]
2 PsiBlast_PDB 80.8344% -45 - C8 -4A91 3.4 GLUQ_ECOLI
34 HHSearch 78.1745% -46 - C8 -1NZJ - GLUQ_ECOLI -
1 PsiBlast_PDB 77.0644% -48 - C8 -1NZJ - GLUQ_ECOLI -
59 Fugue 74.7741% -34 - C8 -1NZJ - GLUQ_ECOLI -
41 HHSearch 71.7533% -26 - C8 -2CFO - SYE_THEEB -
39 HHSearch 71.5332% -4 - C8 -2CV0 - SYE_THET8 -
42 HHSearch 71.4233% -28 - C8 -2CFO 2.8 SYE_THEEB
40 HHSearch 69.4732% 1 * C8 *1J09 - SYE_THET8 -
61 Fugue 68.2530% -7 - C8 -1G59 - SYE_THET8 -
46 HHSearch 65.6428% -18 - C8 -2O5R - SYE1_THEMA -
44 HHSearch 65.5430% 13 - C8 -4GRI 2.9 SYE_BORBU
36 HHSearch 65.2230% 3 - C8 -2JA2 - SYE_MYCTU -
43 HHSearch 65.0730% 13 - C8 -4GRI 3.8 SYE_BORBU
24 PsiBlast_CBE 64.6431% 8 - C8 -2CV0 - SYE_THET8 -
38 HHSearch 64.6130% -6 - C8 -5TGT - SYE_PSEAE -
21 PsiBlast_CBE 63.6231% 12 - C8 -2DXI - SYE_THET8 -
14 PsiBlast_PDB 63.5131% 7 - C8 -2DXI - SYE_THET8 -
12 PsiBlast_PDB 63.5031% 10 - C8 -2CV1 - SYE_THET8 -
26 PsiBlast_CBE 63.4031% 10 - C8 -1N77 - SYE_THET8 -
25 PsiBlast_CBE 63.2831% 9 - C8 -1N78 - SYE_THET8 -
10 PsiBlast_PDB 61.1731% 12 - C8 -2CUZ 4.5 SYE_THET8
3 PsiBlast_PDB 60.6037% -31 - C8 -2CFO 2.8 SYE_THEEB
15 PsiBlast_PDB 57.7432% -5 - C8 -3AFH 7.9 SYE2_THEMA
18 PsiBlast_PDB 56.2731% 9 - C8 -4GRI 3.8 SYE_BORBU
30 PsiBlast_CBE 55.4531% 12 - C8 -4GRI 2.9 SYE_BORBU