@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMF1: (2017-11-07 )
MKNSKKSLMHVLSMSILLSLSSTSFAELVNNPSSGSTGTASLNWSAADASQLLNDEDDEPTPQGSTSVTTTLRGSNAPRVITSAPKVAPIRDTVGYNAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEITLEQIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNAKAHALGMNATHYYESTGLDPRNVSSARDLGILASTASQYGLIRQFSTTPTYDFNLGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNNDATNLLGWLSNLPKRI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



CIT_B_10(3MFD)
DACB_BACSU
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



HJ2_A_3(3BEC)
DACA_ECOLI
[Raw transfer]
44 Fugue 97.1025% -36 - C1 -1HD8 - DACA_ECOLI -
33 HHSearch 89.0830% -6 - C1 -1ES5 - DACX_STRSK -
11 PsiBlast_PDB 87.9331% 17 - C1 -1ESI - DACX_STRSK -
30 HHSearch 87.6430% -11 - C1 -1SKF - DACX_STRSK -
32 HHSearch 86.7429% 31 - C1 -4K91 2.7 ?
21 HHSearch 86.4129% -24 - C1 -3MFD 3.0 DACB_BACSU
6 PsiBlast_PDB 86.1831% 11 - C1 -1ES5 - DACX_STRSK -
2 PsiBlast_PDB 85.8929% 20 - C1 -3IT9 - DACC_ECOLI -
22 HHSearch 85.5929% -22 - C1 -3MFD 2.7 DACB_BACSU
23 HHSearch 85.4228% 39 - C1 -3ITB - DACC_ECOLI -
10 PsiBlast_PDB 85.2231% -1 - C1 -1J9M - DACX_STRSK -
4 PsiBlast_PDB 84.9629% 22 - C1 -3ITB - DACC_ECOLI -
8 PsiBlast_PDB 84.7031% 11 - C1 -1ES2 - DACX_STRSK -
27 HHSearch 84.4527% 37 - C1 -5FSR - DACD_ECOLI -
5 PsiBlast_PDB 84.1331% 11 - C1 -1SKF - DACX_STRSK -
3 PsiBlast_PDB 83.9029% 23 - C1 -3ITA - DACC_ECOLI -
20 PsiBlast_PDB 83.7826% -8 - C1 -3MZE - DACA_ECOLI -
17 PsiBlast_PDB 83.6926% -8 - C1 -3BEB - DACA_ECOLI -
1 PsiBlast_PDB 83.6230% 12 - C1 -4K91 - ? -
24 HHSearch 83.0728% 35 - C1 -3ITB - DACC_ECOLI -