@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VML6: (2017-11-08 )
MSAIYIGVMTGTSMDGVDIVAASFEPLQLHATLTVPFEPELRDELMALTLPDDNEIDRMGKADVALAKMIGHGINSLIEKHQLDRSQIKAIGSHGQTIRHRPEHGFTLQIGDPNIITEITQIPVVSDFRRRDMAAGGQGAPLVPAFHQALFQHPSIHRVILNLGGIANVSMLPANNPDGVFGFDTGPANILMDAWCHRHTGHPYDENGDWAAYGHPIRSLLDRLYAHEYFSKEPPKSTGREDFNIDWLDDQLIDWRNDLTYDELEDTPENIQANLLKLTVRAIQKAIYRSNMETGEVYVCGGGAYNSYLLEQLRWRLRKHNWSVQTTDVLGLSPTWVEATAFAWLAMRFVDGLSGNLPAVTGASDFRILGTITAV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(3QBW)
ANMK_PSEAE
[Raw transfer]



ADP_B_5(3QBW)
ANMK_PSEAE
[Raw transfer]



ADP_A_2(5BVC)
?
[Raw transfer]



4PW_A_3(5BVC)
?
[Raw transfer]



4PW_A_2(5BSB)
?
[Raw transfer]



TRS_A_6(4ZFV)
?
[Raw transfer]



TRS_A_6(4ZFV)
?
[Raw transfer]



4PW_A_4(4ZLU)
?
[Raw transfer]



TRS_A_6(4ZFV)
?
[Raw transfer]



SIN_A_9(3CQY)
ANMK_SHEON
[Raw transfer]



SIN_A_9(3CQY)
ANMK_SHEON
[Raw transfer]
32 HHSearch 91.8950% -31 - C2 -3CQY 2.6 ANMK_SHEON
1 PsiBlast_PDB 91.3649% -30 - C2 -3CQY - ANMK_SHEON -
33 HHSearch 91.1950% -31 - C2 -3CQY 1.9 ANMK_SHEON
29 HHSearch 88.8046% -31 - C2 -3QBX - ANMK_PSEAE -
30 HHSearch 88.5946% -38 - C2 -4MO4 - ANMK_PSEAE -
3 PsiBlast_PDB 86.7744% -29 - C2 -3QBX - ANMK_PSEAE -
28 PsiBlast_CBE 86.7044% -28 - C2 -3QBW 6.3 ANMK_PSEAE
26 PsiBlast_CBE 86.0644% -36 - C2 -4MO4 - ANMK_PSEAE -
24 PsiBlast_CBE 85.5544% -33 - C2 -4MO4 - ANMK_PSEAE -
25 PsiBlast_CBE 85.5344% -32 - C2 -4MO4 - ANMK_PSEAE -
21 PsiBlast_CBE 85.0044% -38 - C2 -4MO5 - ANMK_PSEAE -
23 PsiBlast_CBE 84.9944% -38 - C2 -4MO5 - ANMK_PSEAE -
2 PsiBlast_PDB 84.5344% -31 - C2 -3QBW 6.4 ANMK_PSEAE
22 PsiBlast_CBE 83.8844% -37 - C2 -4MO5 - ANMK_PSEAE -
4 PsiBlast_PDB 82.6644% -34 - C2 -4MO4 - ANMK_PSEAE -
5 PsiBlast_PDB 81.7944% -36 - C2 -4MO5 - ANMK_PSEAE -
50 Fugue 80.4532% 31 - C2 -4ZFV 2.6 ?
31 HHSearch 79.5531% -2 - C2 -4ZFV 2.6 ?
11 PsiBlast_PDB 78.0230% 3 - C2 -5BSB 3.0 ?
12 PsiBlast_PDB 77.8030% 3 - C2 -5BVC 5.2 ?
10 PsiBlast_PDB 77.4530% 2 - C2 -4ZLU 3.0 ?
9 PsiBlast_PDB 76.2830% 4 - C2 -4ZFV 2.6 ?