@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VN80: (2017-11-12 )
MLFSQELWQRNLNLYQKILDLPFNQELANGTLDKEAFCHYVIQDAQYLVAYGRVLAVAAAKAFDADDIMQFSDAAKIAIVVERSLHDDFMKNFGVTKEEFKNTPLTLAGHHYTSFLTATAWSESYPVVLAALLPCFWIYAEVGKDIVSKSVPNNPYQAWIDTYAGEEFHTAVRNVIATVDKVAARCDADTLEKMHAAYTMGAKLEWLFWDSAYHQRQWLGLDQI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PF1_A_3(2QCX)
TENA_BACSU
[Raw transfer]




PF1_B_4(2QCX)
TENA_BACSU
[Raw transfer]




HMH_M_13(1YAK)
TENA_BACSU
[Raw transfer]




HMH_O_15(1YAK)
TENA_BACSU
[Raw transfer]




HMH_K_11(1YAK)
TENA_BACSU
[Raw transfer]




IMD_A_2(3MVU)
?
[Raw transfer]




EDO_A_13(3MVU)
?
[Raw transfer]




IMD_C_11(3NO6)
TENA_STAES
[Raw transfer]




38 HHSearch 94.3829%-125 - C5 -2QCX 4.2 TENA_BACSU
37 HHSearch 92.4429%-124 - C5 -1TYH - TENA_BACSU -
23 PsiBlast_CBE 91.5431%-101 - C5 -1YAK 3.2 TENA_BACSU
3 PsiBlast_PDB 91.2931% -99 - C5 -1YAF - TENA_BACSU -
6 PsiBlast_PDB 91.2530%-100 - C5 -1TYH - TENA_BACSU -
22 PsiBlast_CBE 90.9631%-102 - C5 -1YAK 3.5 TENA_BACSU
21 PsiBlast_CBE 90.7831% -96 - C5 -1YAK 3.5 TENA_BACSU
4 PsiBlast_PDB 90.6631% -95 - C5 -1YAK - TENA_BACSU -
5 PsiBlast_PDB 90.1930% -94 - C5 -2QCX 4.2 TENA_BACSU
43 HHSearch 87.7131% -83 - C5 -3IBX - TENA_HELPX -
7 PsiBlast_PDB 87.0929%-121 - C5 -1UDD - ? -
40 HHSearch 86.2624%-132 - C5 -1RTW - ? -
2 PsiBlast_PDB 86.1130% -81 - C5 -2RD3 - TENA_HELPX -
11 PsiBlast_PDB 85.7724%-140 - C5 -1RTW - ? -
44 HHSearch 85.3731% -83 - C5 -3IBX - TENA_HELPX -
45 HHSearch 84.2329% -80 - C5 -2GM8 - ? -
1 PsiBlast_PDB 83.8530% -81 - C5 -3IBX - TENA_HELPX -
39 HHSearch 83.7124%-123 - C5 -3MVU - ? -
8 PsiBlast_PDB 82.9228%-108 - C5 -2GM7 - ? -
9 PsiBlast_PDB 82.7728%-103 - C5 -2GM8 - ? -