@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP19: (2017-11-19 )
MISTHILDTNLGKPAAQVEVKLFHTATHELIATAITNQDGRVIDFGIKNLGKDAYQLEFEVAPYFSSQQIKTFFPRVCIQFFIEDTNQHYHIPLLISPFAYSTYRGS

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AZA_A_3(2H0F)
HIUH_BACSU
[Raw transfer]




CIT_B_6(4Q14)
?
[Raw transfer]




T44_C_5(3Q1E)
HIUH_DANRE
[Raw transfer]




T44_D_6(3Q1E)
HIUH_DANRE
[Raw transfer]




T44_D_6(3Q1E)
HIUH_DANRE
[Raw transfer]




GOL_A_3(2H0E)
HIUH_BACSU
[Raw transfer]




GOL_A_3(2H0E)
HIUH_BACSU
[Raw transfer]




T44_D_6(3Q1E)
HIUH_DANRE
[Raw transfer]




GOL_B_8(4QXV)
TTHY_HUMAN
[Raw transfer]




T44_C_5(3Q1E)
HIUH_DANRE
[Raw transfer]




36 HHSearch 87.7039%-150 - C3 -3QVA - ? -
11 PsiBlast_PDB 87.3539%-151 - C3 -3QVA - ? -
32 HHSearch 87.2244% -53 - C3 -2GPZ - HIUH_SALDU -
39 HHSearch 82.2341% -38 - C3 -3IWV - HIUH_DANRE -
38 HHSearch 82.0244% -29 - C3 -4Q14 - ? -
7 PsiBlast_PDB 81.7039% -44 - C3 -2H6U - HIUH_DANRE -
37 HHSearch 81.5840% -44 - C3 -3Q1E 4.2 HIUH_DANRE
5 PsiBlast_PDB 81.4140% -31 - C3 -4Q14 - ? -
6 PsiBlast_PDB 80.6539% -36 - C3 -2H1X - HIUH_DANRE -
8 PsiBlast_PDB 80.5038% -43 - C3 -3Q1E 4.8 HIUH_DANRE
29 PsiBlast_CBE 80.0938% -42 - C3 -3Q1E 4.2 HIUH_DANRE
34 HHSearch 79.9242% -35 - C3 -2H0E 2.9 HIUH_BACSU
10 PsiBlast_PDB 79.8138% -34 - C3 -3IWV - HIUH_DANRE -
28 PsiBlast_CBE 79.5440% -26 - C3 -4Q14 3.7 ?
1 PsiBlast_PDB 79.3642% -16 - C3 -2GPZ - HIUH_SALDU -
14 PsiBlast_PDB 78.8239% -9 - C3 -2H0J - HIUH_BACSU -
30 PsiBlast_CBE 78.8138% -36 - C3 -3Q1E 4.6 HIUH_DANRE
9 PsiBlast_PDB 78.6738% -39 - C3 -3IWU - HIUH_DANRE -
31 PsiBlast_CBE 78.2538% -37 - C3 -3Q1E 4.7 HIUH_DANRE
13 PsiBlast_PDB 77.4739% -11 - C3 -2H0F 3.3 HIUH_BACSU
12 PsiBlast_PDB 75.4339% -5 - C3 -2H0E 2.9 HIUH_BACSU