@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP54: (2017-11-19 )
MTMSPIIHSLLDTDLYKFTMLQVVLHKFPQTHSVYHFRCRNLEDTVYPLVDILDDLNEQLDHLCNLKYKEDELQYLRKLRFIKSDFVDYLELFQLKRRFIHASIDEEGRLDIRIEGPMVQAMMFEIFVLAIVNELYFSRIKTDEVWAEGERRLQAKLELIQQYEKAQQPNDPPFLVSDFGTRRRYSFEWQKHVVAAFHNTVPNVFRGTSNVLLAKELNITPIGTMAHEFLQAFQALDVRLRDFQKAALEMWVQEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYEWGDKAYAHYRKLKIDTKTKMLTFSDGLNLPKAWELHQYFKDRFQVSFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISDSPGKTMTDNDTFLAYLRQVFQIEELDEAI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCN_G_7(1YTK)
PNCB_THEAC
[Raw transfer]



FMT_A_6(3OS4)
PNCB_YERPE
[Raw transfer]



FMT_A_6(3OS4)
PNCB_YERPE
[Raw transfer]



PEG_B_14(3OS4)
PNCB_YERPE
[Raw transfer]



DPO_A_12(2F7F)
?
[Raw transfer]



MPD_A_11(2I1O)
PNCB_THEAC
[Raw transfer]



FMT_A_21(4MZY)
?
[Raw transfer]



MLA_A_16(4MZY)
?
[Raw transfer]



TRS_A_10(2I1O)
PNCB_THEAC
[Raw transfer]
17 HHSearch 88.3344%-105 - C4 -3OS4 3.0 PNCB_YERPE
1 PsiBlast_PDB 86.6247% -61 - C4 -1YIR - PNCB2_PSEAE -
16 HHSearch 86.0044%-114 - C4 -3OS4 2.2 PNCB_YERPE
15 HHSearch 84.4247% -43 - C4 -1YIR - PNCB2_PSEAE -
2 PsiBlast_PDB 79.0542% -5 - C4 -3OS4 3.0 PNCB_YERPE
14 HHSearch 78.6039% -25 - C4 -4HL7 - PNCB_VIBCH -
13 HHSearch 78.2639% -24 - C4 -4HL7 - PNCB_VIBCH -
3 PsiBlast_PDB 75.7638% -3 - C4 -4HL7 - PNCB_VIBCH -
5 PsiBlast_PDB 74.2232% -21 - C4 -1YBE - PNCB_AGRFC -
18 HHSearch 73.9334% -5 - C4 -2IM5 - ? -
19 HHSearch 72.2533% -18 - C4 -1YBE - PNCB_AGRFC -
20 HHSearch 71.8233% -13 - C4 -1VLP - NPT1_YEAST -
6 PsiBlast_PDB 71.2632% 1 - C4 -1VLP - NPT1_YEAST -
21 HHSearch 71.1733% -14 - C4 -1VLP - NPT1_YEAST -
4 PsiBlast_PDB 71.0134% 2 - C4 -2IM5 - ? -
35 Fugue 51.2323% 7 - C4 -2F7F 3.1 ?
26 HHSearch 49.2624% 2 * C4 *4MZY 3.0 ?
23 HHSearch 47.8119% -26 - C4 -4YUB - PNCB_HUMAN -
8 PsiBlast_PDB 47.7126% -2 - C4 -4MZY - ? -
22 HHSearch 47.4919% -21 - C4 -4YUB - PNCB_HUMAN -