@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP99: (2017-11-20 )
MEKIWFAEYQKTGIPETVALPAENTSLVDIFERNFQKFGSRDAFIFMDKAMSFNELELASRKFATYLQNLGLAKGTRVAVMMPNVLQYPVVALAVLRAGLVLVNVNPLYTARELEHQLNDSGAEVLVIIENFASVYQSILGKTPVKHVVVASVGDMLGTLKGTLVNFVLRKVRKQIPAWNIPGHVKFNSALNKENPSNYKRPTLTLSDTAVLQYTGGTTGVSKGAELTHRNLVANLLQCDGIFQSKFGANDGAKGDRIVCALPLYHIFAFMVCAMYGMYKGQANILIPNPRDLPAVIKELRKYQPSFFPAVNTLFNALVNNEEFKQLDHSNLKMAMGGGMAVLPSTAEAWKKITGTTIIEGYGLSETSPVATANPPASTEFSGTIGIPLPLTEVAILDDDGKEVPLGEQGEISIRGPQVMKGYWNRPDETAKVMTADGFFRTGDIGVMDSRGYVKIVDRKKDMILVSGFNVYPSEIEEVIAKHPKVLEVAAIGVPDEKSGEVPKLFIVKKDPSLTTEEVLNFAKENLTGYKRPRYVEFMDELPKSNVGKILRKDLRKPV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(5BSM)
4CL2_TOBAC
[Raw transfer]



ATP_A_8(5BUR)
MENE_BACSU
[Raw transfer]



AMP_A_2(3A9V)
?
[Raw transfer]



AMP_A_3(5BSR)
4CL2_TOBAC
[Raw transfer]



A_A_7(5GTD)
MENE_BACSU
[Raw transfer]



GOL_B_8(4RLQ)
?
[Raw transfer]



IXN_A_3(3O83)
?
[Raw transfer]
42 HHSearch 90.4429% -46 - C2 -4WV3 - ? -
43 HHSearch 89.4429% -43 - C2 -4WV3 - ? -
3 PsiBlast_PDB 82.7227% -21 - C2 -4WV3 - ? -
13 PsiBlast_PDB 82.4329% -42 - C2 -3NI2 - ? -
16 PsiBlast_PDB 82.3530% -47 - C2 -3R44 - FAC13_MYCTU -
46 HHSearch 81.9428% -22 - C2 -4RLQ 2.8 ?
12 PsiBlast_PDB 81.4529% -37 - C2 -3A9V 5.3 ?
45 HHSearch 81.0228% -22 - C2 -4RM2 - ? -
19 PsiBlast_PDB 80.5628% -37 - C2 -5BUS - MENE_BACSU -
4 PsiBlast_PDB 80.3630% -9 - C2 -5BSW - 4CL2_TOBAC -
18 PsiBlast_PDB 80.3528% -42 - C2 -5BUR 6.6 MENE_BACSU
9 PsiBlast_PDB 80.2730% -7 - C2 -5BSV - 4CL2_TOBAC -
5 PsiBlast_PDB 80.0130% -5 - C2 -5BSM 7.6 4CL2_TOBAC
8 PsiBlast_PDB 79.9330% -8 - C2 -5BSU - 4CL2_TOBAC -
14 PsiBlast_PDB 79.5328% -34 - C2 -5X8F - ? -
6 PsiBlast_PDB 79.4430% -9 - C2 -5BSR 5.6 4CL2_TOBAC
20 PsiBlast_PDB 79.2628% -37 - C2 -5GTD 4.9 MENE_BACSU
7 PsiBlast_PDB 79.2530% -6 - C2 -5BST - 4CL2_TOBAC -
1 PsiBlast_PDB 79.0732% -2 - C2 -3G7S - ? -
11 PsiBlast_PDB 78.7529% -41 - C2 -3A9U - ? -