@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPA7: (2017-11-20 )
MEKAMLAKRIIPCLDVDNGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHFGAQCIVVAIDAKKTGDNKWEIFTHGGRKPTGIDAIEWAVKMADYGAGELLITSMGADGTKAGYDIALMRAINDRVTIPTIASGGVGNLQHLADGILQGGADAVLAASIFHFGQYTIPEAKQYLAEQGIEMRL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_B_9(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_A_6(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_B_10(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_B_9(1H5Y)
HIS6_PYRAE
[Raw transfer]




0VR_D_2(4EWN)
HIS6_THEMA
[Raw transfer]




1PR_B_4(1OX5)
HIS5_YEAST
[Raw transfer]




1PR_A_5(1OX5)
HIS5_YEAST
[Raw transfer]




POP_B_10(1OX4)
HIS5_YEAST
[Raw transfer]




POP_A_9(1OX4)
HIS5_YEAST
[Raw transfer]




6VP_A_2(5D2W)
?
[Raw transfer]




UNL_A_10(2A0N)
HIS6_THEMA
[Raw transfer]




93 HHSearch 93.2359%-110 * C2 *1KA9 - HIS6_THET8 -
2 PsiBlast_PDB 92.0859%-107 - C2 -1KA9 - HIS6_THET8 -
83 HHSearch 91.8366%-107 - C2 -4EVZ - ? -
1 PsiBlast_PDB 91.0966% -99 - C2 -4EVZ - ? -
4 PsiBlast_PDB 89.4150%-121 - C2 -2A0N 2.5 HIS6_THEMA
10 PsiBlast_PDB 89.2849%-130 - C2 -4EWN 4.5 HIS6_THEMA
6 PsiBlast_PDB 89.1450%-121 - C2 -1THF - HIS6_THEMA -
5 PsiBlast_PDB 88.5050%-122 - C2 -2WJZ - HIS6_THEMA -
7 PsiBlast_PDB 87.7649%-120 - C2 -1VH7 - HIS6_THEMA -
9 PsiBlast_PDB 87.7449%-113 - C2 -5TQL - HIS6_THEMA -
24 PsiBlast_CBE 87.6250%-125 - C2 -3ZR4 - HIS6_THEMA -
8 PsiBlast_PDB 87.2349%-117 - C2 -1GPW - HIS6_THEMA -
84 HHSearch 86.9049%-116 - C2 -1GPW - HIS6_THEMA -
23 PsiBlast_CBE 86.7050%-122 - C2 -3ZR4 - HIS6_THEMA -
85 HHSearch 84.2243%-112 - C2 -5D38 - ? -
15 PsiBlast_PDB 83.7345%-113 - C2 -5D2W 3.9 ?
11 PsiBlast_PDB 83.0745%-108 - C2 -2RKX - ? -
16 PsiBlast_PDB 82.8244%-110 - C2 -5D32 - ? -
19 PsiBlast_PDB 82.3644%-109 - C2 -5D30 - ? -
20 PsiBlast_PDB 82.3344%-110 - C2 -5D2X - ? -
3 PsiBlast_PDB 79.0153% 1 - C2 -1H5Y 2.9 HIS6_PYRAE
22 PsiBlast_CBE 78.5753% 2 - C2 -1H5Y 3.1 HIS6_PYRAE
89 HHSearch 76.4653% 6 - C2 -1H5Y 2.7 HIS6_PYRAE