@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPW1: (2017-11-23 )
MSSSVPRPNFYLYKTRDEDKEAKMEQKLNSFIEVSPQSDFTIHNLPYGIFSRTAEGERQVGVAIGDWVIDLAALEKHGLLKLSDQDTYFNQPTLNKFIQSGKANWSKVRKTLQSLLSVDNLTLQENEALRQEVLVKQDSVTLHLPLQVSGYTDFYSSKEHATNVGCMFRAPKNALLPNWTELPVGYNGRASSVVVSGTQVVRPSGQIKHPNEERPVFSVTRKLDFELETAFVIGKPTELGQPISIENAWDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKSFASAISPWVVTLEALEPFKVEGPKQEPKPLAYLQENIANSYDINLSVEIQSPKSTQPDVICRTNFKYMYWSMAQQLTHHTIGGCNVQVGDLMGSGTISGSTPDSYGSLLELTWNTTKPLTLANGETRGFLQDGDTLIMKGHCEKNGIRIGFGEVRNTVLPALTFDFAETSEPNYEAV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DHJ_A_19(2HZY)
FAAA_MOUSE
[Raw transfer]



DHJ_B_18(2HZY)
FAAA_MOUSE
[Raw transfer]



HBU_B_10(1HYO)
FAAA_MOUSE
[Raw transfer]



HBU_A_11(1HYO)
FAAA_MOUSE
[Raw transfer]



HBU_A_11(1HYO)
FAAA_MOUSE
[Raw transfer]



HBU_A_11(1HYO)
FAAA_MOUSE
[Raw transfer]



AAE_B_13(1QCO)
FAAA_MOUSE
[Raw transfer]



AAE_A_12(1QCO)
FAAA_MOUSE
[Raw transfer]



FUM_A_10(1QCO)
FAAA_MOUSE
[Raw transfer]



FUM_B_11(1QCO)
FAAA_MOUSE
[Raw transfer]
1 PsiBlast_PDB 84.7959% -3 - C4 -4QKU - ? -
22 PsiBlast_CBE 84.7059% -0 - C4 -4QKU - ? -
21 PsiBlast_CBE 84.5059% -1 - C4 -4QKU - ? -
45 HHSearch 84.0560% 3 - C4 -5TI1 - ? -
5 PsiBlast_PDB 83.0054% -8 - C4 -1HYO 3.3 FAAA_MOUSE
2 PsiBlast_PDB 82.6558% -1 - C4 -5TI1 - ? -
32 PsiBlast_CBE 82.5654% -8 - C4 -2HZY 5.5 FAAA_MOUSE
33 PsiBlast_CBE 82.5154% -8 - C4 -1HYO 3.7 FAAA_MOUSE
31 PsiBlast_CBE 82.4854% -11 - C4 -1QCO 3.0 FAAA_MOUSE
6 PsiBlast_PDB 82.3154% -10 - C4 -2HZY 4.4 FAAA_MOUSE
34 Fugue 82.1254% -13 - C4 -1QQJ - FAAA_MOUSE -
3 PsiBlast_PDB 81.8754% -9 - C4 -1QQJ - FAAA_MOUSE -
7 PsiBlast_PDB 81.6953% -7 - C4 -1QCN - FAAA_MOUSE -
46 HHSearch 81.5854% -9 - C4 -1HYO 3.3 FAAA_MOUSE
4 PsiBlast_PDB 81.2954% -8 - C4 -1QCO 3.1 FAAA_MOUSE
44 HHSearch 80.8759% 12 - C4 -4QKU - ? -
47 HHSearch 79.7154% -7 - C4 -1QCN - FAAA_MOUSE -
35 Fugue 79.4759% -79 - C4 -1HYO 3.3 FAAA_MOUSE
53 HHSearch 43.5625% -12 - C4 -3RR6 - ? -
55 HHSearch 42.5223% -12 - C4 -4PFZ - ? -