@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQ87: (2017-11-25 )
MSNSLFINGVWLQGSGTTFVKTNPVDNQTVWSGAEATASDVEKACQAARTAFPAWARLAFAERVAIVEKFAALLEENKKHLAEVISQETSKPFWETLTEVQSMIGKVAISIRAYHQRTGESSTEMADGVASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGLPNGVMNLVQGGRTTGEALAASHEIDGLLFTGSANTGYHLHKQMAGAPEKILALEMGGNNALIIDEIENMDAVVNLTIQSAFVSAGQRCTCARRILVKNGAQGDAFIQRFVEVAKNLKVGRWNDEQQPFMGGVISSAAATNMMNAQQKLLELGAKSLLPMTRPQEDSSLLTPGIIDVTGVAGIPDEEYFGPLTTIQRYDSFDEALKIANATRFGLSVGLVSPKRELFDDLLIEARAGIVNWNKPLTGASSAAPFGGVGASGNHRASAFYAADYCAWPMASLESESLTLPEKLSPGIVLP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(3JU8)
ASTD_PSEAE
[Raw transfer]



NAD_A_3(3JU8)
ASTD_PSEAE
[Raw transfer]



NAD_B_17(3JU8)
ASTD_PSEAE
[Raw transfer]



NAD_B_9(5U0M)
ASTD_MARHV
[Raw transfer]



NAD_A_6(5U0M)
ASTD_MARHV
[Raw transfer]



NAD_A_6(5U0M)
ASTD_MARHV
[Raw transfer]



NAI_A_2(4WB9)
AL1A1_HUMAN
[Raw transfer]



NAI_A_9(4X4L)
AL1A1_HUMAN
[Raw transfer]



TXE_A_4(5AC2)
AL1A1_HUMAN
[Raw transfer]



CIT_A_5(5U0M)
ASTD_MARHV
[Raw transfer]



CIT_B_8(5U0M)
ASTD_MARHV
[Raw transfer]



8YP_A_9(5U0L)
ASTD_MARHV
[Raw transfer]
82 HHSearch 99.2460% -80 - C3 -3JU8 8.0 ASTD_PSEAE
83 HHSearch 97.6760% -81 - C3 -3JU8 7.5 ASTD_PSEAE
3 PsiBlast_PDB 97.1459% -83 - C3 -3JU8 7.5 ASTD_PSEAE
21 PsiBlast_CBE 96.9259% -78 - C3 -5U0M 6.5 ASTD_MARHV
1 PsiBlast_PDB 96.6159% -78 - C3 -5U0L 2.3 ASTD_MARHV
85 HHSearch 96.5159% -75 - C3 -5U0M 6.2 ASTD_MARHV
2 PsiBlast_PDB 96.2159% -76 - C3 -5U0M 6.2 ASTD_MARHV
81 HHSearch 95.8858% -77 - C3 -4KNA - ASTD_BURTA -
4 PsiBlast_PDB 95.6258% -79 - C3 -4KNA - ASTD_BURTA -
84 HHSearch 95.5559% -75 - C3 -5U0L - ASTD_MARHV -
23 PsiBlast_CBE 95.4958% -80 - C3 -4KNA - ASTD_BURTA -
22 PsiBlast_CBE 95.3959% -76 - C3 -5U0L - ASTD_MARHV -
28 PsiBlast_CBE 68.9831% 5 - C3 -4PZ2 - ? -
12 PsiBlast_PDB 68.4931% 6 - C3 -4PZ2 - ? -
27 PsiBlast_CBE 68.1231% 5 - C3 -4PZ2 - ? -
29 PsiBlast_CBE 67.4031% 8 - C3 -4PZ2 - ? -
19 PsiBlast_PDB 67.3228% 5 - C3 -4NMJ - ? -
20 PsiBlast_PDB 67.2528% 8 - C3 -4NMK - ? -
16 PsiBlast_PDB 66.2030% 25 - C3 -5FHZ - AL1A3_HUMAN -
34 PsiBlast_CBE 65.8832% 15 - C3 -4GO4 - ? -