@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQD1: (2017-11-26 )
MHLNSSIDKKMTTLNILFKTTSLCLAMALLVGCNDNDDNDSSTPAPRSNQTVNILAFNDFHGNLEPPKRYVEAANPNDASQTVRIPVGGVSYFADAIKKLKAQNPNNVVVSAGDLISASPLTSSLFLDEPTIEVMNDIQIDFNAVGNHEFDRGTDELRRLQNGGCQQYTSTAPCQINKNFSGAKFNFLAANVAMKNDTSKTIFPAYKVKTYGGIPVAFIGLTLKATPSIVSAAGIKDVEFRDEADTVNALIPELQKQGIEAIVVVVHEGAAPSTKLNQKTCDGLSGPILGILDRLNPAVDIVVSGHTHQSYICDYATKNPAKPFLLTSAGQYGTLITDIKVGLDGKTGDIIKKDAKQIPVQSEAYTSGTTTVSLTDLYQKFSKTPSIEAILDKYRQAVTTISGRVVGTSTAVVSRTQVESGESPLGDMIADAQQAAALQASNQGSDFTLMNPGGVRADLLINSSNQITFGDIFAVQPFGNSIVTLSLTGKQIRDVLEQQWSGANANSPRILQPSKELSYQYAANTSVSPRASNIMVAGSPLVDTKVYRVTVNSFLADGGDNFTVLKEGQNRVGGGQDIDALESYVAQNSKDSPLIIPATTRIKVIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTN_A_4(3IVE)
?
[Raw transfer]



URI_A_5(3IVD)
?
[Raw transfer]



THM_A_5(2Z1A)
?
[Raw transfer]



FMT_A_9(3C9F)
?
[Raw transfer]



FMT_B_10(3C9F)
?
[Raw transfer]



EPE_A_4(3JYF)
?
[Raw transfer]
23 HHSearch 84.8729% -14 - C1 -2Z1A - ? -
1 PsiBlast_PDB 81.5027% -16 - C1 -2Z1A 4.7 ?
26 HHSearch 78.6626% -7 - C1 -3IVE 5.1 ?
25 HHSearch 77.6526% -4 - C1 -3IVD - ? -
42 Fugue 76.8423% 1 - C1 -3ZTV - 5NTD_HAEIN -
22 HHSearch 73.5024% 15 - C1 -4H2I - 5NTD_HUMAN -
2 PsiBlast_PDB 71.7927% -9 - C1 -3IVD 6.6 ?
10 PsiBlast_PDB 71.2024% -6 - C1 -1OI8 - USHA_ECOLI -
24 HHSearch 70.0524% 10 - C1 -4H2G - 5NTD_HUMAN -
15 PsiBlast_PDB 69.6123% 17 - C1 -4H2I - 5NTD_HUMAN -
16 PsiBlast_PDB 68.9623% 36 - C1 -4H1S - 5NTD_HUMAN -
11 PsiBlast_PDB 67.7824% 22 - C1 -4H2F - 5NTD_HUMAN -
14 PsiBlast_PDB 67.6724% 16 - C1 -4H1Y - 5NTD_HUMAN -
12 PsiBlast_PDB 67.5724% 16 - C1 -4H2G - 5NTD_HUMAN -
46 Fugue 66.7419% 15 - C1 -2WDC - ? -
29 HHSearch 66.4923% 48 * C1 *1HPU - USHA_ECOLI -
31 HHSearch 66.4219% 1 - C1 -2WDC - ? -
5 PsiBlast_PDB 66.2524% 26 - C1 -4WWL - USHA_ECOLI -
28 HHSearch 66.1823% 37 - C1 -1HP1 - USHA_ECOLI -
13 PsiBlast_PDB 65.9325% 22 - C1 -1HP1 - USHA_ECOLI -