@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQK0: (2017-11-27 )
MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEEYVEQHTPKLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRHQINRLTLTQYLSHGTRKDEVQVEEEVEDIEGESNSGNAGPLELYTLNLNVEAQKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLSHAEIYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSISETIDILRGLKTKFEDFHHVQYDDKALVSAVELSAKFINDRFLPDKAIDVIDEAGAQCRLKAESEDSLITVENIEDIVSKIARIPPKTVSKDDKSVLENLERDLKRVVFGQDEAITALASAIKLSRAGLKSPDKPVGSFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQIMDHGALTDNNGRKSDFRNVIIVLTTNIGAESISRASIGFTEQDHSSDNQEAMKRAFSPEFRNRLDGVIQFKALPTTVIESVVDKFLTELQAQLDEKRVVLDVDQSACDWLATNGYDRLMGARPMQRLIQEHLKKPLAEMILFGELADHGGNVAVSVKKEDGKAVGLKLEVFEDHHTAEPA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJA)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]
96 Fugue 85.8943% 0 - C- -1QVR - CLPB_THET8 -
1 PsiBlast_PDB 79.0662% 25 - C4 -1KSF - CLPA_ECOLI -
2 PsiBlast_PDB 78.2062% 28 - C4 -1R6B - CLPA_ECOLI -
67 HHSearch 67.6441% 47 - C2 -3J3U - CLPC_BACSU -
68 HHSearch 67.1040% - - C2 -3PXI - CLPC_BACSU -
6 PsiBlast_PDB 65.3538% 58 - C2 -3J3U - CLPC_BACSU -
7 PsiBlast_PDB 65.0536% - - C2 -3PXI - CLPC_BACSU -
3 PsiBlast_PDB 63.7438% 59 - C2 -3J3S - CLPC_BACSU -
5 PsiBlast_PDB 63.6438% 51 - C2 -3J3R - CLPC_BACSU -
4 PsiBlast_PDB 63.2238% 50 - C2 -3J3T - CLPC_BACSU -
66 HHSearch 60.1640% -30 - C3 -5D4W - ? -
73 HHSearch 55.0451% -40 - C2 -4FCV 7.0 CLPB_THET8
10 PsiBlast_PDB 54.6149% -31 - C2 -4LJ5 6.6
23 PsiBlast_CBE 53.9749% -43 - C2 -4LJ7 8.4
9 PsiBlast_PDB 53.8049% -35 - C2 -4LJ4 - -
24 PsiBlast_CBE 53.7449% -34 - C2 -4LJ7 7.3 CLPB_THET8
11 PsiBlast_PDB 53.7249% -35 - C2 -4LJ7 9.0 CLPB_THET8
13 PsiBlast_PDB 52.9149% -30 - C2 -4LJA 7.0
71 HHSearch 52.6349% -25 - C2 -4LJ9 5.6
19 PsiBlast_PDB 52.5650% -32 - C2 -4FCW 7.4 CLPB_THET8
12 PsiBlast_PDB 52.5549% -28 - C2 -4LJ9 5.6
18 PsiBlast_PDB 52.1350% -33 - C2 -4FCV 6.9 CLPB_THET8
26 PsiBlast_CBE 51.6952% -33 - C2 -4FD2 5.5 CLPB_THET8
16 PsiBlast_PDB 51.0452% -33 - C2 -4FD2 4.5 CLPB_THET8
25 PsiBlast_CBE 50.5452% -32 - C2 -4FD2 6.3