@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQN8: (2017-11-28 )
MKIYRLSMSLIANTTVVRGRFLDIQQTVSEPTDIPNQVRYLEDGVLISEHGKIKWFGAWEDAQQHLPAGVEVQHYPEQLIVPGFIDTHIHFPQTEMVGAYGEQLLSWLNTYTFPTEIQFQDKTYASEIAQFFVQELLKHGTTTALVFCTVHPESVDALFEAAERVQMRLIAGKVLMDRNAPEALCDTPETAYSNTKALIEKWHGKGRALYAITPRFAPTSTPEQLERAGQLKQEFPDVYVHTHLSENKDEIAWVKSLFPEQAGYLDVYQHYGLTGKRSVFAHCVHLEDEEWQCMHDTQSAIAFCPTSNLFLGSGLFPLKKTWEKQVKVGLGTDIGAGTSFSLLQTVNEAYKVQQLQGDKLSAYEALYHATLGGAKALDLQDQLGNFNIGKEADFVVLNLKPTALQELRQTKSKSVEDSLFALFTLGDDRNIEATYIYGNRAYQKETAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GUN_B_6(2I9U)
?
[Raw transfer]




GUN_A_5(2I9U)
?
[Raw transfer]




GUN_A_5(2I9U)
?
[Raw transfer]




GUN_A_5(2I9U)
?
[Raw transfer]




TXC_A_3(4AQL)
GUAD_HUMAN
[Raw transfer]




TXC_A_3(4AQL)
GUAD_HUMAN
[Raw transfer]




XAN_A_3(2UZ9)
GUAD_HUMAN
[Raw transfer]




UNL_A_7(4DZH)
?
[Raw transfer]




64 Fugue 82.6332% -16 - C2 -2I9U 4.6 ?
2 PsiBlast_PDB 78.8932% 17 - C2 -4AQL 7.2 GUAD_HUMAN
1 PsiBlast_PDB 78.8332% 16 - C2 -2UZ9 4.5 GUAD_HUMAN
44 HHSearch 78.0133% -11 - C2 -2I9U 4.6 ?
21 PsiBlast_CBE 77.4333% 9 - C2 -2I9U 4.6 ?
3 PsiBlast_PDB 76.1833% 13 - C2 -2I9U 4.6 ?
50 HHSearch 75.8125% -17 - C2 -5HMF - ? -
51 HHSearch 75.2632% 10 - C2 -4AQL 7.2 GUAD_HUMAN
46 HHSearch 75.0125% -14 - C2 -3LS9 - ? -
47 HHSearch 74.0725% -37 - C2 -4DYK - ? -
4 PsiBlast_PDB 73.7832% 23 - C2 -3E0L - GUAD_HUMAN -
48 HHSearch 71.4625% -30 - C2 -4GBD - ? -
49 HHSearch 71.3423% -36 * C2 *4F0R - ? -
45 HHSearch 71.1431% 24 - C2 -3E0L - GUAD_HUMAN -
43 HHSearch 71.0924% -32 - C2 -4DZH - ? -
53 HHSearch 69.3723% -17 - C2 -4V1X - ATZA_PSESD -
52 HHSearch 69.2923% -17 - C2 -4V1Y - ATZA_PSESD -
58 HHSearch 68.8028% -18 - C2 -3HPA - ? -
61 HHSearch 67.9925% -31 - C2 -1P1M - MTAD_THEMA -
9 PsiBlast_PDB 67.2024% -21 - C2 -4V1X - ATZA_PSESD -