@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQQ9: (2017-11-28 )
MRRSEKSKDTKARLAPKQKISYEKKPDPAITAYAVQSLNWLRQAEFLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSLGNPDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDFSIQLFSSLNKLGLEELASVMAGRLHFTLEQQPEFDVDAIPEASDEDAEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_B_6(1SVW)
ENGB_BACSU
[Raw transfer]




GDP_A_3(3PQC)
ENGB_THEMA
[Raw transfer]




GDP_B_2(1SVI)
ENGB_BACSU
[Raw transfer]




GDP_B_2(1SVI)
ENGB_BACSU
[Raw transfer]




GDP_A_4(5UCV)
ENGB_NEIG2
[Raw transfer]




GDP_B_5(3PQC)
ENGB_THEMA
[Raw transfer]




GDP_B_5(3PQC)
ENGB_THEMA
[Raw transfer]




GDP_A_4(5UCV)
ENGB_NEIG2
[Raw transfer]




GOL_B_8(5UCV)
ENGB_NEIG2
[Raw transfer]




GOL_B_8(5UCV)
ENGB_NEIG2
[Raw transfer]




74 Fugue 82.0450%-150 - C2 -1PUI - ENGB_ECOLI -
2 PsiBlast_PDB 81.1851%-129 - C2 -5UCV 6.7 ENGB_NEIG2
22 PsiBlast_CBE 81.0951%-127 - C2 -5UCV 2.4 ENGB_NEIG2
54 HHSearch 80.9552%-152 - C2 -1PUI - ENGB_ECOLI -
1 PsiBlast_PDB 80.6055%-154 - C2 -1PUI - ENGB_ECOLI -
57 HHSearch 79.4653%-119 * C2 *5UCV 6.7 ENGB_NEIG2
56 HHSearch 78.2438%-125 - C2 -1SUL - ENGB_BACSU -
53 HHSearch 78.1445% -32 - C2 -4DHE - ENGB_BURTA -
3 PsiBlast_PDB 77.0542% -39 - C2 -4DHE - ENGB_BURTA -
58 HHSearch 77.0153%-113 - C2 -5UCV 2.4 ENGB_NEIG2
6 PsiBlast_PDB 76.4442%-143 - C2 -3PQC 7.6 ENGB_THEMA
24 PsiBlast_CBE 75.7042%-157 - C2 -3PQC 7.0 ENGB_THEMA
59 HHSearch 75.6640%-142 - C2 -3PQC 7.0 ENGB_THEMA
55 HHSearch 74.0338%-142 - C2 -1SVI 7.0 ENGB_BACSU
23 PsiBlast_CBE 71.2439%-117 - C2 -1SVW 7.4 ENGB_BACSU
5 PsiBlast_PDB 71.2339%-137 - C2 -1SVI 7.1 ENGB_BACSU
4 PsiBlast_PDB 70.9239%-140 - C2 -1SUL - ENGB_BACSU -
7 PsiBlast_PDB 70.6042%-189 - C2 -3PR1 - ENGB_THEMA -
61 HHSearch 52.7522% -27 - C2 -4NON - ? -
63 HHSearch 50.0621% -28 - C2 -3B1V - ? -