@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQX9: (2017-11-29 )
MNYRHHFHAGNFADVMKHVLLLQLLNRLNAKDKPYRYIDTHGGAGKYDLSQAPAQKSGEFLTGIHRLVQLSGMEKRQAPEAIQQYLKLVEELRAQEGKGSYPGSPWFALQGMREIDKATIFEMQRDVFQQLRHNIHDKRAGLHERDAYEGLLAVIPPKEKRGLVMIDPPYELERKDFPQLVELLQSAYKKWPTGVFAVWYPIKDRAMIERFEKKMFKTGIRRQLICEICVWPDDTPVGLNGCGLLVINPPWQFSEQADQALQWLFPHLRMQETGGHAAVRWLVGE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_B_19(4BLW)
RLMJ_ECOLI
[Raw transfer]



SAH_A_4(4BLW)
RLMJ_ECOLI
[Raw transfer]



TRS_A_3(4BLU)
RLMJ_ECOLI
[Raw transfer]



TRS_B_11(4BLU)
RLMJ_ECOLI
[Raw transfer]



EDO_B_16(4BLU)
RLMJ_ECOLI
[Raw transfer]



PEG_B_15(4BLU)
RLMJ_ECOLI
[Raw transfer]



GOL_B_12(4BLU)
RLMJ_ECOLI
[Raw transfer]



EDO_B_22(4BLW)
RLMJ_ECOLI
[Raw transfer]



PEG_B_22(4BLV)
RLMJ_ECOLI
[Raw transfer]



EDO_A_9(4BLV)
RLMJ_ECOLI
[Raw transfer]
14 HHSearch 95.9139% -63 - C5 -4BLV 3.4 RLMJ_ECOLI
3 PsiBlast_PDB 95.4638% -64 - C5 -4BLW 7.8 RLMJ_ECOLI
2 PsiBlast_PDB 95.3438% -60 - C5 -4BLV - RLMJ_ECOLI -
11 PsiBlast_CBE 95.1638% -63 - C5 -4BLW 8.2 RLMJ_ECOLI
15 HHSearch 93.7339% -63 * C5 *4BLU 2.3 RLMJ_ECOLI
12 PsiBlast_CBE 93.7038% -57 - C5 -4BLV 2.5 RLMJ_ECOLI
13 PsiBlast_CBE 93.0038% -60 - C5 -4BLU 3.1 RLMJ_ECOLI
1 PsiBlast_PDB 92.8038% -59 - C5 -4BLU - RLMJ_ECOLI -
37 Fugue 91.7333% -70 - C5 -2OO3 - ? -
16 HHSearch 91.6234% -73 - C5 -2OO3 - ? -
4 PsiBlast_PDB 89.1734% -66 - C5 -2OO3 - ? -
29 HHSearch 42.9915% -24 - C5 -3K0B - ? -
17 HHSearch 41.7115% -24 - C5 -1WXX - ? -
43 Fugue 38.0913% -53 - C3 -3F4M - TP8L2_HUMAN -
19 HHSearch 36.4611% -18 - C5 -3VSE - ? -
40 Fugue 36.2810% 2 - C5 -4ZSF - ? -
18 HHSearch 35.6618% 11 - C5 -4DMG - ? -
30 HHSearch 35.0812% -26 - C5 -1UWV - RLMD_ECOLI -
38 Fugue 35.0713% -17 - C5 -3KJH - ? -
25 HHSearch 34.6914% 32 - C5 -2AS0 - ? -