@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR41: (2017-11-30 )
MTLRNDWTREEIQALYEQPFLDLVFKAQQVHREHFTANTIQVSTLLSIKTGKCPEDCKYCSQSAHYDSKLEAEKRIAVEKVISEAKAAKDSGSSRFCMGAAWRNPHERDMPYVLEMVREVKALGMETCMTLGMLNQSQAERLKDAGLDYYNHNLDTSRKYYSHIISTRTFDDRLNTLDYVRQAGMKVCSGGIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVARIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGLTAEKPKPTVSDLSVDAMSA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DTB_B_10(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_B_7(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_B_7(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_A_5(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_A_5(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_A_5(1R30)
BIOB_ECOLI
[Raw transfer]




32 HHSearch 99.6363% -88 - C3 -1R30 3.6 BIOB_ECOLI
22 Fugue 99.6363% -88 - C3 -1R30 3.6 BIOB_ECOLI
33 HHSearch 99.3563% -88 - C3 -1R30 3.6 BIOB_ECOLI
1 PsiBlast_PDB 99.2763% -88 - C3 -1R30 3.6 BIOB_ECOLI
21 PsiBlast_CBE 98.8963% -88 - C3 -1R30 3.6 BIOB_ECOLI
36 HHSearch 56.9422% 21 - C3 -5FF3 - HYDE_THEMA -
34 HHSearch 53.5822% 27 * C3 *5FEW - HYDE_THEMA -
35 HHSearch 52.2521% 23 - C3 -3T7V - PYLB_METBF -
11 PsiBlast_PDB 52.2423% 8 - C3 -5FF3 - HYDE_THEMA -
5 PsiBlast_PDB 52.1423% 7 - C3 -5FEP - HYDE_THEMA -
7 PsiBlast_PDB 51.5623% 6 - C3 -5FEX - HYDE_THEMA -
15 PsiBlast_PDB 51.5523% 9 - C3 -5FF2 - HYDE_THEMA -
18 PsiBlast_PDB 51.5323% 10 - C3 -5FF0 - HYDE_THEMA -
6 PsiBlast_PDB 51.4823% 10 - C3 -5FES - HYDE_THEMA -
12 PsiBlast_PDB 51.3223% 10 - C3 -3CIX - HYDE_THEMA -
17 PsiBlast_PDB 51.2223% 10 - C3 -5FEZ - HYDE_THEMA -
19 PsiBlast_PDB 51.1223% 10 - C3 -5FF4 - HYDE_THEMA -
16 PsiBlast_PDB 50.9423% 9 - C3 -5FEW - HYDE_THEMA -
13 PsiBlast_PDB 50.1823% 10 - C3 -4JXC - HYDE_THEMA -
14 PsiBlast_PDB 50.1323% 13 - C3 -4JY9 - HYDE_THEMA -