@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRA4: (2017-12-01 )
MSFDLSVIPHKNIVLAVTGGIAAYKSAILVRRLKDYGFDVRVVMTHGAQAFITPLTFQALSGNPVHTELLDPEAEAGMGHIELARWADLLLVAPASCDTLAKFANGLADDLLSTLFLATKAPVWVAPAMNQQMWAAKATQRNLQTLVEDGVHVIMPDAGEQACGDVGLGRMPEPEEIARQVAGYFHQAQRAIAEKFGLLAGKRVVITAGPTREAIDPVRYISNHSTGKMGFALAAACYAAGAKVTLIAGPVSLDTPNGVQRVNVASARQMLDVSMESLETGCDIFIATAAVADYRVAEVAEHKIKKAGDELNVSLVKNPDIVATIAAQEKRPFMVGFAAETQNVEEYAAGKLVAKKLDMIACNDVSRADIGFASDENAMTVFFAESYHMKKRELEKASKQEISQQLVEAISDALRRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]



PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]



CTP_A_7(1U7W)
COABC_ECOLI
[Raw transfer]



CTP_B_8(1U7W)
COABC_ECOLI
[Raw transfer]



PMT_F_6(1U7Z)
COABC_ECOLI
[Raw transfer]



PMT_G_7(1U7Z)
COABC_ECOLI
[Raw transfer]



C5P_K_11(1U80)
COABC_ECOLI
[Raw transfer]



C5P_I_9(1U80)
COABC_ECOLI
[Raw transfer]



C5P_J_10(1U80)
COABC_ECOLI
[Raw transfer]
21 PsiBlast_CBE 84.7351% -84 - C4 -1U7Z 10.1 COABC_ECOLI
19 PsiBlast_CBE 83.8051% -89 - C4 -1U80 4.6 COABC_ECOLI
4 PsiBlast_PDB 83.6751% -91 - C4 -1U80 4.1 COABC_ECOLI
2 PsiBlast_PDB 83.5251%-103 - C4 -1U7W 4.8 COABC_ECOLI
20 PsiBlast_CBE 83.1951% -89 - C4 -1U80 3.6 COABC_ECOLI
3 PsiBlast_PDB 82.6751% -83 - C4 -1U7Z 10.1 COABC_ECOLI
53 Fugue 82.5851% -79 - C4 -1U7Z 10.5 COABC_ECOLI
23 PsiBlast_CBE 82.2451%-113 - C4 -1U7W 4.5 COABC_ECOLI
22 PsiBlast_CBE 82.2451% -85 - C4 -1U7Z 9.4 COABC_ECOLI
1 PsiBlast_PDB 82.0551%-104 - C4 -1U7U - COABC_ECOLI -
5 PsiBlast_PDB 80.3739%-114 - C4 -5INT - ? -
55 Fugue 75.8335% -69 - C4 -1E20 - HAL3A_ARATH -
7 PsiBlast_PDB 75.4035% -52 - C4 -1E20 - HAL3A_ARATH -
54 Fugue 75.3235% -68 - C4 -1E20 - HAL3A_ARATH -
9 PsiBlast_PDB 73.7135% -42 - C4 -1MVN - HAL3A_ARATH -
44 HHSearch 73.0935% -58 - C4 -1E20 - HAL3A_ARATH -
40 HHSearch 72.0527%-144 - C4 -5H75 - ? -
45 HHSearch 71.8425%-169 - C4 -1G63 - EPID_STAEP -
39 HHSearch 71.0527%-185 - C4 -5H75 - ? -
31 HHSearch 70.6738% -18 - C4 -4QJI - ? -