@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRB1: (2017-12-01 )
MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDTKVMKARLKGKRTTGGAIEILVERMPNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGRHENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAMLIDKLEVLKLKLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_B_4(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_B_4(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




CIT_B_2(1WDI)
QUEA_THET2
[Raw transfer]




CIT_B_2(1WDI)
QUEA_THET2
[Raw transfer]




16 HHSearch 73.5946% -27 - C5 -1VKY 4.1 QUEA_THEMA
12 PsiBlast_CBE 72.8545% -26 - C5 -1VKY 4.1 QUEA_THEMA
15 HHSearch 72.5946% -25 - C5 -1VKY 4.1 QUEA_THEMA
1 PsiBlast_PDB 71.5746% -5 - C5 -1YY3 - QUEA_BACSU -
36 Fugue 71.0644% -56 - C5 -1VKY 4.1 QUEA_THEMA
2 PsiBlast_PDB 70.5745% -24 - C5 -1VKY 4.1 QUEA_THEMA
14 HHSearch 69.1147% 18 - C5 -1YY3 - QUEA_BACSU -
3 PsiBlast_PDB 65.5841% -22 - C5 -1WDI 4.2 QUEA_THET2
17 HHSearch 65.3442% -18 - C5 -1WDI 4.2 QUEA_THET2
24 HHSearch 39.3114%-243 - C6 -2WBQ - ARGHX_STRVI -
27 HHSearch 37.2214%-218 - C6 -2WBO - ARGHX_STRVI -
20 HHSearch 36.8533%-190 - C6 -1NX8 - CARC_PECCC -
19 HHSearch 36.6822%-253 - C6 -4M23 - ? -
18 HHSearch 36.4822%-237 - C6 -4NE0 - ? -
28 HHSearch 35.7413%-216 - C6 -2OG6 - ASNO_STRCO -
29 HHSearch 34.7613%-201 - C6 -2OG5 - ASNO_STRCO -
31 HHSearch 34.3914%-152 - C6 -4BG1 - BODG_HUMAN -
21 HHSearch 34.0518%-212 - C6 -1JR7 - CSID_ECOLI -
30 HHSearch 33.6414%-150 - C6 -4C5W - BODG_HUMAN -
32 HHSearch 31.8614%-167 - C6 -1VZ4 - ATSK_PSEPU -