@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRI7: (2017-12-03 )
MTDIVIVNGARTAMGGFQGSLSGLTAPELGAVTIKEAIARAGLQPTDVEEVIMGCVLPAGLKQGPARQAMRKAGLPDSTGAVTINKLCGSGMKAVMQAADMIKAGSAEIVVAGGMESMTNAPYVLPKARAGYRMGHGEIKDHMFFDGLEDAETGRLMGSFAQDMANTRGYTREQMDDFAIRSLKCAQTAITEGYFKDEIVPVTVSTRKGDVIVDQDEQPLNAKIDKIPSLKPAFAKDGTITAANASSISDGASALVLTSSEVAAQRGLQPLAKIIATASNSQHPSEFTIAPVGAIEKVLKKAGWNAQDVDLWEINEAFAMVTMCPIDDFKLDPEKVNIHGGACALGHPVGSTGSRIILTLIHALKRTGGKKGVAALCIGGGEATAVAIEILY

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_14(4XL2)
THLA_CLOAB
[Raw transfer]



PEG_A_5(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_A_8(4XL2)
THLA_CLOAB
[Raw transfer]



PEG_B_8(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



COA_A_5(1WL4)
THIC_HUMAN
[Raw transfer]



GOL_A_6(4XL3)
?
[Raw transfer]
1 PsiBlast_PDB 91.0149% -59 - C6 -4WYR 2.3 THLA_CLOAB
129 HHSearch 90.1546% -64 - C6 -1WL4 4.3 THIC_HUMAN
24 PsiBlast_CBE 89.3648% -58 - C6 -4XL4 - ? -
26 PsiBlast_CBE 89.2551% -55 - C6 -4O99 - THIL_CUPNH -
22 PsiBlast_CBE 89.2249% -60 - C6 -4XL2 2.4 THLA_CLOAB
5 PsiBlast_PDB 89.1548% -54 - C6 -4XL3 2.8 ?
4 PsiBlast_PDB 88.9548% -56 - C6 -4N45 - ? -
6 PsiBlast_PDB 88.8948% -55 - C6 -4XL4 - ? -
21 PsiBlast_CBE 88.8049% -58 - C6 -4WYR 2.1 THLA_CLOAB
3 PsiBlast_PDB 88.7049% -58 - C6 -4XL2 2.4 THLA_CLOAB
7 PsiBlast_PDB 88.6851% -57 - C6 -4O99 - THIL_CUPNH -
65 PsiBlast_CBE 88.2648% -55 - C6 -5F0V - ATOB_ECOLI -
27 PsiBlast_CBE 87.9951% -56 - C6 -4O99 - THIL_CUPNH -
23 PsiBlast_CBE 87.6849% -58 - C6 -4N44 - ? -
83 PsiBlast_CBE 87.6647% -50 - C6 -5F38 - ? -
63 PsiBlast_CBE 87.6248% -52 - C6 -5F0V - ATOB_ECOLI -
85 PsiBlast_CBE 87.5047% -47 - C6 -5F38 - ? -
2 PsiBlast_PDB 87.4949% -55 - C6 -4N44 - ? -
84 PsiBlast_CBE 87.3047% -51 - C6 -5F38 - ? -
29 PsiBlast_CBE 87.3050% -53 - C6 -4O9C - THIL_CUPNH -
125 HHSearch 87.0449% -51 - C6 -4XL3 2.4 ?
25 PsiBlast_CBE 86.9948% -52 - C6 -4XL3 2.4 ?