@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRM8: (2017-12-03 )
MEDFVMKFWQRLFTAFLQRFHLMRFFGRNRSFKELHQSSYAQEISKNLSKRLLNASRAQTNDLLKQFDTHLMGLTEEQAYTQQMTVGLNEVTHEKPLTWWQHLWYCYRNPFNILLSLLALIAFFTDDLTGSTIISVMVILSTLLRYWQEAKSNQAADALKAMVSNTATVLRHQVSAEDLELMHERYGIDTKNQTTHQFEISIQYLVPGDVILLSAGDMIPADCRILSAKDLFVSQAAMTGESMPVEKFPLQKNLEETSALELDNIVFMGTNIVSGSAQAVVLSTGIQTYFGALAHRVTATDRSTTAFQMGVNKVSWLLIRFMLVMAPVVLFINGFTKGDWAEAFLFALSVAVGLTPEMLPMIVTSTLAKGAVFLSKKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLSQHIDVQGEKSDFVLMQAFLNSYYQTGLKNLLDVAVLEAVDDQIKIQKLRYKKLDEVPFDFDRRRMSVVVKTPQQKAHMITKGAVEEMLKVCRYVEVNGKVEPLTKQREVAIEALTQRYNRDGLRVVAVAYREFKNHQENYSVVDESDLILIGYITFLDPPKESAKEAVQSLHAHGVTVKVLTGDNEFVTQKVCREIGLNYDQVLLGGVIETLTDQQLKRAVEQYHIFAKLSPVHKERIVEQLKVNGHVVGFLGDGINDAAAIRAADIGISVDTAVDIAKESADLILLEKSLMVLEKGVIEGRRTFANMLKYIKMTASSNFGNVFSVLIASAFIPFLPMLPIHLLIQNLLYDVSQIVIPFDNVDEELIAKPQRWQPEEVGRFMVVFGPISSIFDMITFGVMWFVFSANTPEHQTLFQSGWFVVGLLTQTLIVHMIRTAQIPFIQSRAATPLLIMTAVIMCIGIFLPMGPLASYLKLQALPLSYFLYLPLILGAYICVTQWVKKIYIRRYGWQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(1T5S)
AT2A1_RABIT
[Raw transfer]



ADP_A_8(1T5T)
AT2A1_RABIT
[Raw transfer]



ATP_B_5(2YJ4)
?
[Raw transfer]



ACP_A_3(2BY4)
AT2A1_RABIT
[Raw transfer]



ADP_A_4(2OA0)
AT2A1_RABIT
[Raw transfer]



MF4_A_4(2O9J)
AT2A1_RABIT
[Raw transfer]
10 PsiBlast_PDB 84.8226% 0 - C- -1WPG - AT2A1_RABIT -
21 Fugue 76.6525% -29 - C1 -3B8E - AT1A1_PIG -
22 Fugue 75.3326% -28 - C1 -1SU4 - AT2A1_RABIT -
34 HHSearch 75.1426% -15 - C1 -3AR4 - AT2A1_RABIT -
31 HHSearch 74.2024% -24 - C1 -2ZXE - ? -
23 Fugue 68.3026% -31 - C1 -5KSD - PMA2_ARATH -
37 HHSearch 67.9625% -34 - C1 -5KSD - PMA2_ARATH -
14 PsiBlast_PDB 66.5026% 17 - C1 -2C88 - AT2A1_RABIT -
12 PsiBlast_PDB 66.4526% 14 - C1 -2AGV - AT2A1_RABIT -
16 PsiBlast_PDB 66.4126% 17 - C1 -2C8L - AT2A1_RABIT -
13 PsiBlast_PDB 66.3226% 18 - C1 -2BY4 3.2 AT2A1_RABIT
15 PsiBlast_PDB 66.2326% 17 - C1 -2C8K - AT2A1_RABIT -
19 PsiBlast_PDB 65.8926% 12 - C1 -2OA0 4.5 AT2A1_RABIT
1 PsiBlast_PDB 65.6326% 11 - C1 -4YCM - AT2A1_RABIT -
18 PsiBlast_PDB 65.2326% 9 - C1 -2O9J 2.8 AT2A1_RABIT
5 PsiBlast_PDB 65.2126% 16 - C1 -1IWO - AT2A1_RABIT -
7 PsiBlast_PDB 64.8226% 4 - C1 -1T5S 6.6 AT2A1_RABIT
2 PsiBlast_PDB 64.6826% 16 - C1 -4YCN - AT2A1_RABIT -
8 PsiBlast_PDB 64.1926% 1 - C1 -1T5T 6.2 AT2A1_RABIT
3 PsiBlast_PDB 64.1126% 16 - C1 -4BEW - AT2A1_RABIT -