@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VS71: (2017-12-06 )
MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRYIRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWRRAD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5CA_B_11(3C8Z)
MSHC_MYCS2
[Raw transfer]



5CA_A_12(3C8Z)
MSHC_MYCS2
[Raw transfer]



5CA_B_11(3C8Z)
MSHC_MYCS2
[Raw transfer]



AMP_B_6(3SP1)
SYC_BORBU
[Raw transfer]



CYS_B_6(1LI7)
SYC_ECOLI
[Raw transfer]



CYS_A_5(1LI7)
SYC_ECOLI
[Raw transfer]



EDO_A_6(3KFL)
?
[Raw transfer]
34 HHSearch 91.8154% -94 - C2 -1U0B - SYC_ECOLI -
56 Fugue 90.9053% -95 - C2 -1U0B - SYC_ECOLI -
3 PsiBlast_PDB 90.0253% -93 - C2 -1U0B - SYC_ECOLI -
57 Fugue 86.6153%-111 - C2 -1LI5 - SYC_ECOLI -
2 PsiBlast_PDB 86.3853%-113 - C2 -1LI7 2.8 SYC_ECOLI
1 PsiBlast_PDB 85.6653%-110 - C2 -1LI5 - SYC_ECOLI -
21 PsiBlast_CBE 82.5453%-114 - C2 -1LI7 3.3 SYC_ECOLI
22 PsiBlast_CBE 64.1832% -36 - C2 -3SP1 5.3 SYC_BORBU
36 HHSearch 63.7333% -36 - C2 -3C8Z 5.5 MSHC_MYCS2
35 HHSearch 63.2833% -22 - C2 -3SP1 - SYC_BORBU -
4 PsiBlast_PDB 62.7132% -36 - C2 -3SP1 - SYC_BORBU -
5 PsiBlast_PDB 60.2936% -25 - C2 -3C8Z 7.2 MSHC_MYCS2
23 PsiBlast_CBE 59.1236% -28 - C2 -3C8Z 5.5 MSHC_MYCS2
50 HHSearch 45.7519% -20 - C2 -1A8H - SYM_THET8 -
38 HHSearch 45.4220% -21 - C2 -5K0S - SYM_BRUSU -
37 HHSearch 45.3920% -21 - C2 -4PY2 - ? -
51 HHSearch 45.1418% 9 - C2 -3ZIU - ? -
40 HHSearch 44.9220% -19 - C2 -2CT8 - SYM_AQUAE -
52 HHSearch 43.8718% 8 - C2 -3ZIU - ? -
49 HHSearch 43.2819% -17 - C2 -2D5B - SYM_THET8 -