@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSI0: (2017-12-08 )
MDIFPISLKLQQQRCLIVGGGHIALRKATLLAKAGAIIDVVAPAIEDQLLQLITTTGGVSFIEAFAEKFLSTPYRLVIAATNDAEVNKTVFEQCEARNLLVNSIDDIPHCRFMVPAIIDRSPLIVSVASNGTSPVLSRQIRTQLETSIPHGMGKLAEFSGKWRNQVKEKISNPDERRIFWENLYASPLKEQVFNDNLDVADSMLEQALQEWEAPKGEVYLVGAGPGDPELITLKALRLMQQADVVIYDRLVSAPILELCRRDATKIYVGKERSNHSVPQEGINALLVDYAKKGKRVCRLKGGDPFIFGRGGEEIQELFQAGVPFQIVPGITAASGCSAYAGIPLTHRDYALSVRFLTGHLKEGSPELPWNELVYENQTLVLYMGLVGLERICEQLIAHGQRPDMPVALISKGTTPEQKVVVGSLADIASKVTEHQIHAPTLTIIGEVVRLREQLQWN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_D_4(1PJS)
CYSG_SALTY
[Raw transfer]



SAH_A_2(2YBO)
?
[Raw transfer]



SAH_A_2(2YBO)
?
[Raw transfer]



SAH_D_4(1PJT)
CYSG_SALTY
[Raw transfer]



UP2_A_3(2YBQ)
?
[Raw transfer]



UP2_A_3(2YBQ)
?
[Raw transfer]



SAH_E_5(1PJT)
CYSG_SALTY
[Raw transfer]



SAH_E_5(1PJT)
CYSG_SALTY
[Raw transfer]
2 HHSearch 79.8550% -21 - C1 -1PJT 8.0 CYSG_SALTY
1 HHSearch 79.7250% -18 - C1 -1PJQ - CYSG_SALTY -
53 PsiBlast_CBE 79.6649% -21 * C1 *1PJT 8.0 CYSG_SALTY
34 PsiBlast_PDB 79.4849% -18 - C1 -1PJQ - CYSG_SALTY -
33 PsiBlast_PDB 78.5849% -17 - C1 -1PJT 6.0 CYSG_SALTY
35 PsiBlast_PDB 77.6649% -17 - C1 -1PJS 7.9 CYSG_SALTY
37 PsiBlast_PDB 71.6052%-153 - C1 -2YBQ 8.5 ?
10 HHSearch 71.0554%-152 - C1 -2YBQ 8.5 ?
60 PsiBlast_CBE 68.1345%-135 - C1 -1S4D - SUMT_PSEDE -
62 PsiBlast_CBE 68.0945%-137 - C1 -1S4D - SUMT_PSEDE -
59 PsiBlast_CBE 67.8345%-147 - C1 -1S4D - SUMT_PSEDE -
38 PsiBlast_PDB 67.6445%-142 - C1 -1S4D - SUMT_PSEDE -
57 PsiBlast_CBE 67.4845%-148 - C1 -1S4D - SUMT_PSEDE -
54 PsiBlast_CBE 67.1745%-145 - C1 -1S4D - SUMT_PSEDE -
6 HHSearch 67.0645%-133 - C1 -1S4D - SUMT_PSEDE -
63 PsiBlast_CBE 66.0445%-141 - C1 -1S4D - SUMT_PSEDE -
36 PsiBlast_PDB 65.7552%-104 - C1 -2YBO 7.8 ?
8 HHSearch 65.5954%-104 - C1 -2YBO 7.8 ?
64 PsiBlast_CBE 65.3645%-106 - C1 -1S4D - SUMT_PSEDE -
7 HHSearch 64.7745%-103 - C1 -1S4D - SUMT_PSEDE -