@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSK4: (2017-12-08 )
MKSATGLTGSGSRDWFIQRVSAVVLAAYTVVLFGWILCKGGFDYQQWAGFMMTLPMKIFSLLAILSLIAHAWIGMWQVFTDYVTTRQMGPSAKGLRLVLTTAVIIAVFVYAIWGIQIFWAN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AT5_C_11(2ACZ)
DHSD_ECOLI
[Raw transfer]




UQ1_B_12(1ZOY)
DHSD_PIG
[Raw transfer]




N1M_D_12(3AE4)
DHSD_PIG
[Raw transfer]




UQ_C_12(1YQ4)
DHSD_CHICK
[Raw transfer]




HEM_C_12(1NEK)
DHSD_ECOLI
[Raw transfer]




HEM_C_12(1NEN)
DHSD_ECOLI
[Raw transfer]




HEM_C_12(1NEK)
DHSD_ECOLI
[Raw transfer]




HEM_C_12(1NEK)
DHSD_ECOLI
[Raw transfer]




HEB_C_10(2ACZ)
DHSD_ECOLI
[Raw transfer]




46 HHSearch 87.9539%-238 - C3 -1NEK 6.4 DHSD_ECOLI
35 Fugue 86.9438%-234 - C3 -1NEK 6.4 DHSD_ECOLI
45 HHSearch 85.4839%-278 - C3 -2WDQ - DHSD_ECOLI -
1 PsiBlast_PDB 69.6440%-182 - C3 -1NEK 6.4 DHSD_ECOLI
2 PsiBlast_PDB 67.6040%-167 - C3 -1NEN 6.8 DHSD_ECOLI
3 PsiBlast_PDB 67.4640%-176 - C3 -2ACZ 7.4 DHSD_ECOLI
4 PsiBlast_PDB 64.3540%-208 - C3 -2WDQ - DHSD_ECOLI -
10 PsiBlast_PDB 64.3139%-226 - C3 -2WU5 - DHSD_ECOLI -
9 PsiBlast_PDB 63.6439%-218 - C3 -2WS3 - DHSD_ECOLI -
8 PsiBlast_PDB 63.5940%-203 - C3 -2WU2 - DHSD_ECOLI -
7 PsiBlast_PDB 63.2840%-210 - C3 -2WP9 - DHSD_ECOLI -
6 PsiBlast_PDB 62.8140%-205 - C3 -2WDR - DHSD_ECOLI -
25 PsiBlast_CBE 62.2440%-212 - C3 -2WDV - DHSD_ECOLI -
5 PsiBlast_PDB 62.1540%-212 - C3 -2WDV - DHSD_ECOLI -
48 HHSearch 59.9921%-231 - C3 -1ZOY - DHSD_PIG -
36 Fugue 59.4521%-211 - C3 -1ZOY Error DHSD_PIG
47 HHSearch 58.0821%-227 - C3 -3AE4 Error DHSD_PIG
49 HHSearch 57.5221%-234 - C3 -1YQ4 Error DHSD_CHICK
51 HHSearch 57.2314%-185 * C3 *1NEN - DHSC_ECOLI -
52 HHSearch 55.5314%-167 - C3 -2WDQ - DHSC_ECOLI -