@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VT89: (2017-12-12 )
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNLKSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVNHEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQSYLQFGMTPPEPKN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(1IN7)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN8)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_4(1IN6)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ATP_A_5(1J7K)
RUVB_THEMA
[Raw transfer]




ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]




ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]




ANP_M_13(1IXR)
RUVB_THET8
[Raw transfer]




ADE_B_6(1HQC)
RUVB_THET8
[Raw transfer]




ADE_B_6(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




6 PsiBlast_PDB 92.6153%-123 - C1 -1J7K 8.7 RUVB_THEMA
132 HHSearch 92.2754%-122 * C1 *1IN4 8.4 RUVB_THEMA
4 PsiBlast_PDB 92.0753%-121 - C1 -1IN6 8.4 RUVB_THEMA
1 PsiBlast_PDB 91.9653%-121 - C1 -1IN4 8.5 RUVB_THEMA
3 PsiBlast_PDB 91.0353%-123 - C1 -1IN8 8.8 RUVB_THEMA
5 PsiBlast_PDB 90.4753%-123 - C1 -1IN7 8.7 RUVB_THEMA
131 HHSearch 90.2253%-116 - C1 -1IN5 8.0 RUVB_THEMA
2 PsiBlast_PDB 90.1753%-116 - C1 -1IN5 7.9 RUVB_THEMA
7 PsiBlast_PDB 89.2053%-110 - C1 -3PFI 8.2 RUVB_CAMJE
135 HHSearch 88.5052%-111 - C1 -3PFI 8.2 RUVB_CAMJE
8 PsiBlast_PDB 82.6357% -19 - C1 -1IXS 6.0 RUVB_THET8
134 HHSearch 82.0757% -21 - C1 -1IXS 6.0 RUVB_THET8
121 Fugue 78.4156% -11 - C1 -1HQC 3.2 RUVB_THET8
9 PsiBlast_PDB 78.2456% -11 - C1 -1HQC 3.2 RUVB_THET8
133 HHSearch 77.4057% -10 - C1 -1HQC 4.2 RUVB_THET8
21 PsiBlast_CBE 77.2056% -10 - C1 -1HQC 4.2 RUVB_THET8
10 PsiBlast_PDB 74.3457% -20 - C1 -1IXR 4.9 RUVB_THET8
157 HHSearch 46.6025% 19 - C1 -4WW0 - FTSH_AQUAE -
128 Fugue 43.4619% 13 - C1 -5C3C - ? -
122 Fugue 42.8616% -98 - C1 -1IQP - RFCS_PYRFU -