@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTC7: (2017-12-12 )
MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPRLKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPNGKLQSVQRHLKCLTDGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARNSERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQQAEQNYQQLEQQKHVLDKQQQWFERKAKLEQEVQAKQQLFQTQQNHHQQLASEREQLKRLEVFSEIRPQVFQQAQNLQTLQQLEPQIQQAQTKFNELVQIFETGQKQYQLAEQQLKQTIDFEQQHQHTLNQVRQSIQERAFIADEYKKCKEKRHVLEQKLSPLQQQQNAVQQQIAQLEQNKIHLQQQLIQTQQYAVLDKGLSAHLHQLGQFIQNYQAIEEQLGNPTFARQKLSEAKSELEQLTASLGTVEQIELKLEQQRKDKDQKLAQVTQLDLIQQKIKIYHELYAELQQFTEKHTQASAQEEQLKTVCQLAEQDYQTAKNEREKLQHILQQQRLLHTENIEQLRANLKEGEACLVCGSTHHPYRIDDSAVSKALFDLQQQQEQQAVALEQTKFNVWQTQQHALTQCRAELEQVQKYLAQLQAKQTNLQQELEQAFNLNQLHIELNQAPEQILQTLNELRQATQTAISLFDSENLRLTQAIKQHNQLIQTIQRNESLLNTAQQWQQQVQHIVECLSETEQHAWQQASSQTAKQTWAILDARAKQLEQQEQLSQRFEQQQQELKMLTASLEQMTKQIDEIDQNLQEITLKGQQNNEKAVSLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTRQHFEQQKQALDQLKHQHQHTEQHQQQIDGQIQNWLKAHTDFQASDLTALIQINSAQEQDIRNRLNHAERLLSEVSSALKTMQEQLSEHLQTQPDIEYEKLFTLIQDNIAKLKAQLEVRDGLKLKLELHQQNLAKQQKYAEQIQNIQQEEHRWSRISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLKRLDQSLSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEGFGTLDASSLHMVMNALDQLQNQGRQVILISHIQEMHERIPVQIQVKPLGAGASTIEIVG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3QKU)
?
[Raw transfer]
4 PsiBlast_PDB 65.6624% -79 - C1 -3AUY - ? -
6 PsiBlast_PDB 62.4424% -78 - C1 -5DNY - ? -
5 PsiBlast_PDB 61.8524% -73 - C1 -3AV0 - RAD50_METJA -
1 PsiBlast_PDB 61.3024% -76 - C1 -5F3W - RAD50_METJA -
48 HHSearch 59.6828%-133 - C1 -3AUY - ? -
47 HHSearch 59.1628%-134 - C1 -3AUY - ? -
49 HHSearch 58.2328% -60 - C1 -3QF7 - RAD50_THEMA -
46 HHSearch 53.4428% -54 - C1 -3QF7 - RAD50_THEMA -
9 PsiBlast_PDB 52.4923% -52 - C1 -3QKT - -
2 PsiBlast_PDB 52.2230%-147 - C1 -3QF7 - RAD50_THEMA -
29 Fugue 52.1416% -17 * C1 *1E69 - ? -
3 PsiBlast_PDB 51.1730%-171 - C1 -4W9M - ? -
41 HHSearch 49.9922% -35 - C1 -5H67 - SMC_BACSU -
8 PsiBlast_PDB 49.8928%-151 - C1 -3THO - RAD50_THEMA -
38 HHSearch 49.6523% -84 - C1 -1II8 - RAD50_PYRFU -
54 HHSearch 48.3917% -35 - C1 -1QHL - MUKB_ECOLI -
28 Fugue 48.1020%-125 - C1 -1F2U - ? -
17 PsiBlast_PDB 46.2128%-145 - C1 -4YMS - ? -
40 HHSearch 45.7822% -38 - C1 -5H66 - ? -
39 HHSearch 45.4021% - - C1 -3QKS - RAD50_PYRFU -