@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTL8: (2017-12-14 )
MPNQQTIHHFDVIIVGSGGAGLSLALSLPGHFNIAVLAKAALTEASTFYAQGGVAAVLDETDSIQQHINDTMIAGAHLCEMDAVQHTVEGGRPSVDFLLKQGVQFTLDEDEQLHLTREGGHSQRRIIHSADATGKAISTTLVERAKERKNITIFENYIAIDLITSHKLGHTEQTNRAIGLYALDESTEKVHTFLAPFTALACGGAMKAYLYTSNPDIATGDGIAMAYRAGCRVANMEFNQFHPTCLYHPQARSFLITEAMRGEGAYLRLPDGERFMLRFDDRAELAPRDIVARTIDHEIKRLGIRHVWLDITHKSPEFIKEHFPTLYARLLELGIDITKDMIPVVPAAHYTCGGVVVDSNSQTDIEGLYAIGETSYTGLHGANRMASNSLLECFVYGMSAAKDIESKFDKNFKLPEVPTWDDSQVTNPDEDVVILQNWDELRSTMWNYVGIVRTTKRLERALHRIEMLKREITEYYQDYRVSKNLIELRNLVLVSEMIVRCAMHRKESRGLHYTLDYPETSSEIRKTVLTPPNFAVEQPLVNTSV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_4(1KNR)
NADB_ECOLI
[Raw transfer]



FAD_A_4(1KNR)
NADB_ECOLI
[Raw transfer]



FAD_A_3(1KNP)
NADB_ECOLI
[Raw transfer]



TEO_A_11(1YQ3)
SDHA_CHICK
[Raw transfer]



TEO_A_11(1YQ3)
SDHA_CHICK
[Raw transfer]



3NP_A_10(1ZP0)
SDHA_PIG
[Raw transfer]



ASP_A_11(5KXJ)
NADB_SALTY
[Raw transfer]



ASP_A_11(5KXJ)
NADB_SALTY
[Raw transfer]



3NP_A_11(1YQ4)
SDHA_CHICK
[Raw transfer]
1 PsiBlast_PDB 92.7660%-123 - C2 -1CHU - NADB_ECOLI -
4 PsiBlast_PDB 91.2661%-120 - C2 -5KXJ 3.3 NADB_SALTY
2 PsiBlast_PDB 85.6660% -33 - C2 -1KNP 12.4 NADB_ECOLI
3 PsiBlast_PDB 84.5160% -34 - C2 -1KNR 12.5 NADB_ECOLI
95 Fugue 83.3158% -77 - C2 -1CHU - NADB_ECOLI -
80 HHSearch 81.8360% -43 - C2 -5KXJ 3.3 NADB_SALTY
83 HHSearch 80.8461% -4 - C2 -1KNR 12.5 NADB_ECOLI
77 HHSearch 70.1833% 0 - C- -2H88 - SDHA_CHICK -
76 HHSearch 67.0633% -1 * C2 *1YQ3 4.9 SDHA_CHICK
21 PsiBlast_CBE 66.6934% -84 - C2 -2E5V - NADB_SULTO -
5 PsiBlast_PDB 66.5634% -85 - C2 -2E5V - NADB_SULTO -
26 PsiBlast_CBE 66.4931% -9 - C2 -5C3J - ? -
32 PsiBlast_CBE 65.9631% -9 - C2 -4YSY - ? -
40 PsiBlast_CBE 65.8931% 0 - C- -2FBW - SDHA_CHICK -
39 PsiBlast_CBE 65.8931% 0 - C- -2FBW - SDHA_CHICK -
38 PsiBlast_CBE 65.8931% 0 - C- -2H88 - SDHA_CHICK -
37 PsiBlast_CBE 65.8931% 0 - C- -2H88 - SDHA_CHICK -
12 PsiBlast_PDB 65.8531% -12 - C2 -4YSY - ? -
8 PsiBlast_PDB 65.7831% -6 - C2 -3VR9 - ? -
11 PsiBlast_PDB 65.7131% -11 - C2 -4YSX - ? -
64 PsiBlast_CBE 60.7931% -8 - C2 -1ZP0 2.6 SDHA_PIG
42 PsiBlast_CBE 59.9431% -4 - C2 -1YQ3 4.9 SDHA_CHICK
41 PsiBlast_CBE 59.7631% -3 - C2 -1YQ4 3.1 SDHA_CHICK