@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTQ2: (2017-12-14 )
MIEVVDGQRKLSECKRIVVKIGSSLLTANGQGLDLDAISHWAKQIADLHNAGHEIILVSSGAVAEGMVRMKLASRPTDLPSLQACAAIGQMGLIHTWSSVLENHSIRAAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIRFGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLSTVRATDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASGESDNVLSRVMAGEMLGTLFTTDKDRMTAHQQWLAAHLQTAGRLVIDDGAVEAIKLKHRSLLPVGVKTVEGHFDRGDVVECVDKQGKRVAVGRVNFSSRSAEIIKGLSSDKVYQVLGEARSLEMIHRDHMAIY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_5(2AKO)
PROB_CAMJE
[Raw transfer]



ADP_D_8(2AKO)
PROB_CAMJE
[Raw transfer]



DPO_A_2(3D40)
?
[Raw transfer]
44 HHSearch 84.4651% - - C- -4Q1T - PROB_BURTA -
3 PsiBlast_PDB 83.0639%-124 - C1 -2J5T - PROB_ECOLI -
46 HHSearch 80.3839% -57 - C1 -2J5T - PROB_ECOLI -
1 PsiBlast_PDB 78.0551% - - C- -4Q1T - PROB_BURTA -
45 HHSearch 74.2039% 0 - C- -2J5V - PROB_ECOLI -
2 PsiBlast_PDB 73.4039% 0 - C- -2J5V - PROB_ECOLI -
38 Fugue 73.2138% 0 - C- -2J5V - PROB_ECOLI -
4 PsiBlast_PDB 72.6843%-134 - C1 -2W21 - PROB_ECOLI -
47 HHSearch 68.7233%-125 - C1 -2AKO 5.5 PROB_CAMJE
5 PsiBlast_PDB 67.4132%-105 - C1 -2AKO 5.1 PROB_CAMJE
43 Fugue 51.3320% -45 - C1 -2BNE - PYRH_ECOLI -
61 HHSearch 50.8627% -57 - C1 -3NWY - PYRH_MYCTU -
42 Fugue 49.9620% -46 * C1 *2A1F - PYRH_HAEIN -
48 HHSearch 48.8821% -4 - C1 -3LL9 - IPK_METTH -
53 HHSearch 48.5223% -41 - C1 -2RD5 - NAGK_ARATH -
49 HHSearch 48.3922% -28 - C1 -2BUF - ARGB_PSEAE -
6 PsiBlast_PDB 48.3227% -62 - C1 -3NWY - PYRH_MYCTU -
14 PsiBlast_PDB 48.1333%-142 - C1 -3L76 - ? -
55 HHSearch 47.4124% -53 - C1 -2AP9 - ARGB_MYCTU -
58 HHSearch 46.8920% -35 - C1 -1OH9 - ARGB_ECOLI -