@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTR8: (2017-12-15 )
MKIVILNKPYDVLSQFRKDEAHMTVSDFVDDPTLRIAGRLDMDSEGLVFLTDHGGLNQFITNPANKKYKTYLVQVDGDVTEEALEQLRKGVELNDGMTLPAKAIKVSEPEWLWDRDPPVRYRASIPTSWIEISICEGRNRQVRRMTSAVGFPTLRLIRTKIGTIDLVQLGLQPGETKEIEPLLYPDFKDVPAEQPYRSRSYVRKPGGTGGKPMVRKNKDGSAKKSGTKRIWQMDESEKPRRKTNGTTRPNTKAPRGRSRNSR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U_A_2(1KSV)
RSUA_ECOLI
[Raw transfer]



BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]



BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]



URA_A_2(1KSL)
RSUA_ECOLI
[Raw transfer]



URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]



URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]



URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]



DTT_B_4(2OLW)
RLUE_ECOLI
[Raw transfer]
16 HHSearch 95.8253% -89 - C4 -2OML - RLUE_ECOLI -
14 PsiBlast_CBE 95.0153% -90 - C4 -2OLW 2.0 RLUE_ECOLI
2 PsiBlast_PDB 94.8953% -89 - C4 -2OML - RLUE_ECOLI -
1 PsiBlast_PDB 94.5253% -89 - C4 -2OLW - RLUE_ECOLI -
9 PsiBlast_PDB 75.0334% -7 - C4 -1VIO 2.4 RSUA_HAEIN
36 Fugue 73.0136% 63 - C4 -1KSK 3.0 RSUA_ECOLI
18 HHSearch 68.2333% 10 - C4 -1VIO 2.4 RSUA_HAEIN
19 HHSearch 68.1437% 20 - C4 -1KSK 3.0 RSUA_ECOLI
4 PsiBlast_PDB 64.9536% 30 - C4 -1KSL 2.4 RSUA_ECOLI
5 PsiBlast_PDB 64.7536% 27 - C4 -1KSV 4.1 RSUA_ECOLI
3 PsiBlast_PDB 64.5036% 33 - C4 -1KSK 3.0 RSUA_ECOLI
17 HHSearch 63.8032% 28 - C4 -3DH3 - RLUF_ECOLI -
15 HHSearch 62.8732% 25 - C4 -2GML - RLUF_ECOLI -
6 PsiBlast_PDB 57.4934% 57 - C4 -4LAB - RLUB_ECOLI -
8 PsiBlast_PDB 56.1630% 24 - C4 -2GML - RLUF_ECOLI -
7 PsiBlast_PDB 55.8631% 33 - C4 -3DH3 - RLUF_ECOLI -
38 Fugue 48.4815% 45 - C4 -1R3E - TRUB_THEMA -
23 HHSearch 48.2515% -4 - C4 -1PRZ - RLUD_ECOLI -
24 HHSearch 47.4715% -3 - C4 -1V9F - RLUD_ECOLI -
28 HHSearch 45.4915% 4 * C4 *2AUS - TRUB_PYRAB -