@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTZ3: (2017-12-16 )
MSGQIYFVSGIDTEIGKTYATGFLAKLWTEQGKKVITQKLIQTGNADISEDIQKHREIMGQGWFQEDHDKLTMPEIFSYPASPHLATRLDNREIDFQKIENATKTLAERFEIVLLEGAGGLMVPLTTSLLTIDYVAQHQFPVILVTSGRLGSINHTLLSLEALKSRGLKLKALVYNLKDESKDPLISQDTSNYLKDHLAIHFPEAEWIELAKMNELKN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(1A82)
BIOD1_ECOLI
[Raw transfer]




ACP_A_4(1DAH)
BIOD1_ECOLI
[Raw transfer]




ACP_E_5(1DAG)
BIOD1_ECOLI
[Raw transfer]




ADP_A_6(1DAK)
BIOD1_ECOLI
[Raw transfer]




ADP_A_4(1BS1)
BIOD1_ECOLI
[Raw transfer]




ADP_A_5(1DAM)
BIOD1_ECOLI
[Raw transfer]




ADP_C_3(1DAD)
BIOD1_ECOLI
[Raw transfer]




ADP_A_4(1DAF)
BIOD1_ECOLI
[Raw transfer]




DSD_C_3(1DAI)
BIOD1_ECOLI
[Raw transfer]




IKT_C_3(1DAE)
BIOD1_ECOLI
[Raw transfer]




EDO_A_16(3QXC)
BIOD_HELPY
[Raw transfer]




34 HHSearch 80.4228% - - C- -1BYI - BIOD1_ECOLI -
33 HHSearch 79.9728% 14 * C2 *1DBS - BIOD1_ECOLI -
32 HHSearch 76.4422% -41 - C2 -3OF5 - BIOD_FRATT -
14 PsiBlast_PDB 76.4329% -42 - C2 -3OF5 - BIOD_FRATT -
11 PsiBlast_PDB 76.2232% -18 - C2 -1DAI 3.4 BIOD1_ECOLI
8 PsiBlast_PDB 76.1032% -16 - C2 -1DAF 6.2 BIOD1_ECOLI
6 PsiBlast_PDB 75.8532% -17 - C2 -1DAD 5.4 BIOD1_ECOLI
10 PsiBlast_PDB 75.4832% -17 - C2 -1DAH 5.5 BIOD1_ECOLI
4 PsiBlast_PDB 75.1632% -18 - C2 -1A82 6.5 BIOD1_ECOLI
5 PsiBlast_PDB 74.9632% - - C- -1BYI - BIOD1_ECOLI -
36 HHSearch 74.8324% -38 - C2 -3FGN - BIOD_MYCTU -
18 PsiBlast_PDB 74.7630% -44 - C2 -3QXJ - BIOD_HELPY -
1 PsiBlast_PDB 74.4132% -14 - C2 -1DAM 4.5 BIOD1_ECOLI
35 HHSearch 74.3124% -44 - C2 -4WOP - BIOD_MYCTU -
16 PsiBlast_PDB 74.0830% -45 - C2 -3QXC - BIOD_HELPY -
9 PsiBlast_PDB 74.0332% -18 - C2 -1DAG 5.7 BIOD1_ECOLI
15 PsiBlast_PDB 73.8730% -42 - C2 -3MLE - BIOD_HELPY -
3 PsiBlast_PDB 73.8232% -19 - C2 -1DAK 5.8 BIOD1_ECOLI
2 PsiBlast_PDB 73.6432% -17 - C2 -1BS1 4.6 BIOD1_ECOLI
7 PsiBlast_PDB 73.4732% -17 - C2 -1DAE 3.4 BIOD1_ECOLI