@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VU08: (2017-12-16 )
MKSLWLDIGNTRLKYWITENQQIIEHAAELHLQSPADLLLGLIQHFKHQGLHRIGISSVLDTENNQRIQQILKWLEIPVVFAKVHAEYAGLQCGYEVPSQLGIDRWLQVLAVAEEKENYCIIGCGTALTIDLTKGKQHLGGYILPNLYLQRDALIQNTKGIKIPDSAFDNLNPGNNTVDAVHHGILLGLISTIESIMQQSPKKLLLTGGDAPLFAKFLQKYQPTVETDLLLKGLQQYIAHYPKD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAU_A_3(2F9W)
COAX_PSEAE
[Raw transfer]



PAU_A_3(2F9W)
COAX_PSEAE
[Raw transfer]



GOL_B_6(2F9W)
COAX_PSEAE
[Raw transfer]
35 HHSearch 76.6629% -67 * C2 *2F9W 4.5 COAX_PSEAE
2 PsiBlast_PDB 76.3429% -54 - C2 -2F9W 4.3 COAX_PSEAE
1 PsiBlast_PDB 72.4929% -55 - C2 -2F9T - COAX_PSEAE -
32 HHSearch 70.9324% -37 - C2 -3DJC - COAX_LEGPH -
34 HHSearch 69.9125% -13 - C2 -3BEX - COAX_THEMA -
36 HHSearch 69.0623% -28 - C2 -4O5F - COAX_BURTA -
11 PsiBlast_PDB 68.3525% -6 - C2 -5B8H - COAX_BURCJ -
12 PsiBlast_PDB 68.1425% -12 - C2 -4O8K - COAX_BURTA -
10 PsiBlast_PDB 67.9125% 2 - C2 -4O5F - COAX_BURTA -
7 PsiBlast_PDB 67.2924% -15 - C2 -3DJC - COAX_LEGPH -
3 PsiBlast_PDB 67.2126% 8 - C2 -3BEX - COAX_THEMA -
6 PsiBlast_PDB 66.9926% 5 - C2 -2GTD - COAX_THEMA -
24 Fugue 66.5226% -12 - C2 -2H3G - COAX_BACAN -
23 Fugue 66.2825%-150 - C2 -2NRH - COAX_CAMJE -
31 HHSearch 65.9225% -36 - C2 -2H3G - COAX_BACAN -
4 PsiBlast_PDB 65.5926% 6 - C2 -3BF1 - COAX_THEMA -
5 PsiBlast_PDB 64.4826% 7 - C2 -3BF3 - COAX_THEMA -
37 HHSearch 64.2623% -87 - C2 -2NRH - COAX_CAMJE -
21 Fugue 63.9924% -0 - C2 -2GTD - COAX_THEMA -
9 PsiBlast_PDB 59.2728% -28 - C2 -2H3G - COAX_BACAN -