@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUG4: (2017-12-18 )
MSILSWDDFEDDSQKPAAPEHKSAPVNPEKTPDSQNVSAAQPSSQSMAAPQSTGTHSVRSTNPTDSMARASEALEHLDVAPGLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDIALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRLLRNLIAFYCVLEGIFFYCGFTQILSMGRRNKMNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGGALSW

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FEO_B_4(1AV8)
RIR2_ECOLI
[Raw transfer]



FEO_A_2(1W68)
RIR2_MOUSE
[Raw transfer]



ACY_A_4(1W69)
RIR2_MOUSE
[Raw transfer]
2 PsiBlast_PDB 91.5754% -55 - C4 -1SYY - RIR2_CHLTR -
1 PsiBlast_PDB 91.2954% -54 - C4 -2ANI - RIR2_CHLTR -
22 PsiBlast_CBE 90.1254% -44 - C4 -4M1I - RIR2_CHLTR -
4 PsiBlast_PDB 89.5254% -47 - C4 -4D8G - RIR2_CHLTR -
3 PsiBlast_PDB 89.4254% -47 - C4 -4D8F - RIR2_CHLTR -
29 PsiBlast_CBE 89.2054% -43 - C4 -4D8F - RIR2_CHLTR -
6 PsiBlast_PDB 88.6254% -39 - C4 -4M1I - RIR2_CHLTR -
23 PsiBlast_CBE 88.5054% -44 - C4 -4M1I - RIR2_CHLTR -
41 HHSearch 86.0355% - - C4 -4M1H - RIR2_CHLTR -
40 HHSearch 85.8555% - * C4 *4M1H - RIR2_CHLTR -
5 PsiBlast_PDB 83.6754% - - C4 -4M1H - RIR2_CHLTR -
48 HHSearch 72.1730% -82 - C4 -1H0O - RIR2_MOUSE -
19 PsiBlast_PDB 71.7828% -81 - C4 -3VPN - RIR2_HUMAN -
9 PsiBlast_PDB 71.6629% -78 - C4 -1H0N - RIR2_MOUSE -
10 PsiBlast_PDB 71.2829% -82 - C4 -1H0O - RIR2_MOUSE -
18 PsiBlast_PDB 70.8428% -80 - C4 -3VPO - RIR2_HUMAN -
11 PsiBlast_PDB 70.8429% -80 - C4 -1W68 3.1 RIR2_MOUSE
17 PsiBlast_PDB 70.2628% -79 - C4 -3OLJ - RIR2_HUMAN -
20 PsiBlast_PDB 70.1528% -81 - C4 -3VPM - RIR2_HUMAN -
13 PsiBlast_PDB 70.1129% -81 - C4 -1XSM - RIR2_MOUSE -