@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUQ0: (2017-12-19 )
MTVKILAVDMDGTFLNSKKQYNKARFLKQYEQLKQNNIRFVVASGNQLAKLVTYFPEINHEIAFIAENGAHVVDAGQELAFAHLSKEQFIEILNAIDPVYTSKMVICGKQSAYVHSSMNAEDYAKVARYFEKLTVIDDFYALDDLVCKITFTAQENESFTIFEHFQKQSFVKDKVLVPVSSGFNFIDLILPDQHKAHGLKLLLQKWQVQPDQVVAIGDNNNDIQMIKAAGYGFAVEALKSVTPYTTANNEQEGALQVIDLVLQHQPPFA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_9(1RLM)
SUPH_ECOLI
[Raw transfer]



AF3_B_11(1RLT)
SUPH_ECOLI
[Raw transfer]



AF3_D_13(1RLT)
SUPH_ECOLI
[Raw transfer]



GOL_C_13(1RLM)
SUPH_ECOLI
[Raw transfer]



GOL_B_11(1RLM)
SUPH_ECOLI
[Raw transfer]



AF3_C_12(1RLT)
SUPH_ECOLI
[Raw transfer]



GOL_D_14(1RLT)
SUPH_ECOLI
[Raw transfer]



GOL_D_14(1RLM)
SUPH_ECOLI
[Raw transfer]



GOL_C_15(1RLT)
SUPH_ECOLI
[Raw transfer]



GOL_D_14(1RLM)
SUPH_ECOLI
[Raw transfer]



AF3_A_10(1RLT)
SUPH_ECOLI
[Raw transfer]



CIT_B_4(3DAO)
?
[Raw transfer]
3 PsiBlast_PDB 95.5038%-126 - C- -2HF2 - SUPH_ECOLI -
24 PsiBlast_CBE 95.2640%-115 - C1 -1RLM 3.4 SUPH_ECOLI
21 PsiBlast_CBE 94.7740%-114 - C1 -1RLT 3.1 SUPH_ECOLI
26 PsiBlast_CBE 93.7240%-114 - C1 -1RLM 3.3 SUPH_ECOLI
25 PsiBlast_CBE 93.4340%-109 - C1 -1RLM 4.0 SUPH_ECOLI
1 PsiBlast_PDB 92.2740%-107 - C1 -1RLM 2.3 SUPH_ECOLI
22 PsiBlast_CBE 92.1640%-109 - C1 -1RLT 2.8 SUPH_ECOLI
2 PsiBlast_PDB 91.9640%-106 - C1 -1RLT 2.9 SUPH_ECOLI
23 PsiBlast_CBE 90.2040%-109 - C1 -1RLT 2.9 SUPH_ECOLI
45 HHSearch 87.0741% -50 - C1 -1RLM 3.4 SUPH_ECOLI
50 HHSearch 75.9333% -42 - C1 -3L7Y - ? -
4 PsiBlast_PDB 72.3233% -14 - C1 -3L7Y - ? -
46 HHSearch 59.3120% -64 - C1 -3DAO 3.8 ?
48 HHSearch 59.0819% -32 - C1 -4ZEV - ? -
49 HHSearch 57.5419% -25 - C1 -4ZEX - ? -
5 PsiBlast_PDB 57.1823% -15 - C1 -4DW8 - ? -
56 HHSearch 56.9422% -22 - C1 -1NRW - YWPJ_BACSU -
6 PsiBlast_PDB 56.8023% -13 - C1 -3NIW - ? -
47 HHSearch 56.2318% -26 - C1 -2B30 - ? -
15 PsiBlast_PDB 54.7822% 3 - C1 -4ZEV - ? -