@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUQ6: (2017-12-19 )
MEKNCGSGQSKLKALRMHIYFEVDFQEQAQHYQAVLHSRGVTVDLQPIEKLNARFLRLNPDLALCVDENGLWLSANGMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPVLVDATAGLGHDSLLMAYLGAQIQLVERHPILFTLLEDSKAQAQRDPFLSQFMDRIQLIFADSASYLKQLDQEEKTVDVVYLDPMFPQRDQNQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGGHLLELAKKVAKRVIVKRPRHAIFLANQEPAHQWQGDACRFDAYFQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(2OYR)
RSMJ_SHIFL
[Raw transfer]



TRS_A_2(2PKW)
RSMJ_SALTY
[Raw transfer]



TRS_A_2(2PKW)
RSMJ_SALTY
[Raw transfer]



EDO_A_7(3LL7)
?
[Raw transfer]
13 HHSearch 82.7035% 1 - C1 -2PKW 3.0 RSMJ_SALTY
12 HHSearch 81.7135% 7 - C1 -2OYR - RSMJ_SHIFL -
11 HHSearch 80.0636% -31 - C1 -2R6Z - RSMJ_NEIGO -
3 PsiBlast_PDB 77.9234% -22 - C1 -2PKW 3.0 RSMJ_SALTY
2 PsiBlast_PDB 76.1135% -33 - C1 -2OYR 5.3 RSMJ_SHIFL
10 HHSearch 73.4336% -1 - C1 -2R6Z - RSMJ_NEIGO -
1 PsiBlast_PDB 71.8735% -26 - C1 -2PGX - RSMJ_ECO57 -
35 Fugue 63.6219% -21 - C1 -3GDH - TGS1_HUMAN -
5 PsiBlast_PDB 59.0621% -38 - C1 -3EGI - TGS1_HUMAN -
4 PsiBlast_PDB 57.6522% -11 - C1 -3GDH - TGS1_HUMAN -
14 HHSearch 50.9418%-121 - C1 -3LL7 2.8 ?
20 HHSearch 47.5219%-105 - C1 -4DMG - ? -
42 Fugue 46.4213% -14 - C1 -3A25 - TYW2_PYRHO -
27 HHSearch 46.3819% -79 - C1 -2IGT - ? -
21 HHSearch 46.2616% -98 - C1 -1UWV - RLMD_ECOLI -
38 Fugue 45.9414% -13 - C1 -1JG1 - PIMT_PYRFU -
31 HHSearch 45.3216% -63 - C1 -2JJQ - ATRMA_PYRAB -
26 HHSearch 43.5018% -83 - C1 -1WXX - ? -
24 HHSearch 41.7317% -52 - C1 -3BT7 - TRMA_ECOLI -
18 HHSearch 40.0312% -31 - C1 -1NV8 - PRMC_THEMA -