@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUY4: (2017-12-21 )
MSVVAFKQVDVFTSQAFKGNPVAVIMDASTLTSEQMQAIANWTNLSETTFVLPAIDSQADYQVRIFTPQSELPFAGHPTIGTAYALLEAGLVKAKEGQLVQQCAAGLVTLTVNDSNHISFELPKPKITPLDALQTQKLAEILKCKINTQWNAALVDVGARWVVLQAVNAKAVLASQPDLNALKQFSLEMKVTGSTIYGFYEESNEQKRIEVRSFAPAYGVNEDPVCGSGNGSVASFIRYHSILPAQNDVMLSSQGQALGREGQLQLELHQDKILVGGAAVTCIDGTIKL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(1U1W)
PHZF_PSEFL
[Raw transfer]




3HA_B_6(1U1W)
PHZF_PSEFL
[Raw transfer]




3HA_A_5(1U1W)
PHZF_PSEFL
[Raw transfer]




HHA_A_3(1XUA)
PHZF_PSEFL
[Raw transfer]




HHA_B_4(1U1X)
PHZF_PSEFL
[Raw transfer]




W81_A_2(5IWE)
PHZF_PSEFL
[Raw transfer]




PEG_A_4(5IWE)
PHZF_PSEFL
[Raw transfer]




25 HHSearch 74.8833% -60 - C2 -1T6K - PHZF_PSEFL -
42 Fugue 73.6837% -2 - C2 -1YM5 - YHI9_YEAST -
21 HHSearch 73.2432% -60 - C2 -1XUB - PHZF_PSEFL -
1 PsiBlast_PDB 73.1937% 11 - C2 -1YM5 - YHI9_YEAST -
4 PsiBlast_PDB 72.0033% -46 - C2 -1T6K - PHZF_PSEFL -
19 PsiBlast_CBE 71.4133% -45 - C2 -1U1W 5.2 PHZF_PSEFL
6 PsiBlast_PDB 70.9533% -44 - C2 -1U1X - PHZF_PSEFL -
7 PsiBlast_PDB 70.8333% -46 - C2 -1XUA 4.3 PHZF_PSEFL
17 PsiBlast_CBE 70.6633% -44 - C2 -1XUA - PHZF_PSEFL -
18 PsiBlast_CBE 70.6133% -44 - C2 -1U1X 5.1 PHZF_PSEFL
5 PsiBlast_PDB 70.4833% -43 - C2 -1U1W 5.2 PHZF_PSEFL
9 PsiBlast_PDB 70.4032% -41 - C2 -1U1V - PHZF_PSEFL -
10 PsiBlast_PDB 70.0232% -43 - C2 -1XUB - PHZF_PSEFL -
8 PsiBlast_PDB 69.8032% -45 - C2 -5IWE 4.7 PHZF_PSEFL
24 HHSearch 69.4228% -24 - C2 -1SDJ - YDDE_ECOLI -
28 HHSearch 69.2327% -77 - C2 -4DUN - ? -
23 HHSearch 69.1537% 19 - C2 -1YM5 - YHI9_YEAST -
26 HHSearch 67.8228% -71 - C2 -1S7J - ? -
3 PsiBlast_PDB 67.1231% -14 - C2 -1QY9 - YDDE_ECOLI -
2 PsiBlast_PDB 66.3331% -12 - C2 -1SDJ - YDDE_ECOLI -