@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUY9: (2017-12-21 )
MNIHVEIDTHWCLEQLLQEGRITERDKLLVQTTNRQKDQLKWHPLQWIAHFNLKDQHHVQAHLSLNRLCQWFADRAQLPLFVIDPLKADVSALTQVMSQEFAIRNHILAVEVHADRIVIGTDQPFQTDWLNNLEKSLAPKKIERVFLNPEQLQRYLREYYQVSRAVNSAQKDAAHDRDNKGVEALLQLGDSQNPDANDQHIVKLVDWILQFAFEQSASDIHMEPRKDNGKVRFRIDGVLHTIYNMPSNTLTAVISRIKILGRLNVAEKRKPQDGRLKTRTPKGQETELRLSTLPTAFGEKLVMRIFDPDVLVRSFQQLGFDQSLLQQWQRITQNSHGIILVTGPTGSGKTTTLYSSLKQLATEQVNVCTIEDPIEMLEPSFNQMQVNHAIELGFADGVRALMRQDPDIIMIGEIRDQDTANMAIQAALTGHLVLSTLHTNDAPSSLTRLHDLGVQPFLTAATILGVLAQRLVRKLCPHCKQQTHINEDEWQHLTFDYIMEMPEKVYRAVGCEECRHTGYKGRIGIYEFMPVSLELKHLISSHATLNELRSQTKKESVEPLRIAGARKVIEGLTTLEEVLRVVPLN

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_5(5TSG)
?
[Raw transfer]




ADP_C_8(5TSG)
?
[Raw transfer]




ACP_C_9(3JVV)
PILT_PSEAE
[Raw transfer]




ADP_A_2(5FL3)
?
[Raw transfer]




ATP_A_2(2EWW)
?
[Raw transfer]




ACP_C_9(3JVV)
PILT_PSEAE
[Raw transfer]




ADP_A_2(5FL3)
?
[Raw transfer]




FMT_D_11(5TSG)
?
[Raw transfer]




50 HHSearch 88.1646%-101 - C3 -5IT5 - ? -
49 HHSearch 88.0546%-103 - C3 -5IT5 - ? -
29 PsiBlast_CBE 87.8946%-104 - C3 -5IT5 - ? -
30 PsiBlast_CBE 87.7446%-102 - C3 -5IT5 - ? -
32 PsiBlast_CBE 87.7246%-106 - C3 -5IT5 - ? -
3 PsiBlast_PDB 87.7246%-104 - C3 -5IT5 - ? -
31 PsiBlast_CBE 87.3546%-108 - C3 -5IT5 - ? -
28 PsiBlast_CBE 85.8246%-104 - C3 -5IT5 - ? -
45 HHSearch 83.4735%-107 - C3 -5TSH - ? -
27 PsiBlast_CBE 82.4638% -90 - C3 -5TSG 5.1 ?
1 PsiBlast_PDB 82.1738% -90 - C3 -5TSG 5.7 ?
21 PsiBlast_CBE 81.8938% -90 - C3 -5TSH - ? -
24 PsiBlast_CBE 81.0138% -90 - C3 -5TSH - ? -
2 PsiBlast_PDB 80.9738% -90 - C3 -5TSH - ? -
25 PsiBlast_CBE 80.9638% -96 - C3 -5TSH - ? -
22 PsiBlast_CBE 80.6438% -91 - C3 -5TSH - ? -
5 PsiBlast_PDB 80.1345% - - C3 -4KSS - GSPE_VIBCH -
23 PsiBlast_CBE 79.7538% -93 - C3 -5TSH - ? -
4 PsiBlast_PDB 79.7545% - - C3 -4KSR - GSPE_VIBCH -
26 PsiBlast_CBE 79.3938% -81 - C3 -5TSG 3.9 ?
52 HHSearch 56.6932% 7 - C3 -5FL3 7.4 ?
51 HHSearch 51.5730% 18 * C3 *3JVV 5.8 PILT_PSEAE
6 PsiBlast_PDB 48.6434% -11 - C3 -5FL3 6.7 ?
33 PsiBlast_CBE 45.9237% -23 - C3 -3JVV 5.3 PILT_PSEAE
8 PsiBlast_PDB 42.4440% -22 - C3 -2EWW 5.0 ?