@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV22: (2017-12-21 )
MMRRLSTQDQNFKQVFAELLAFETVNDPNLVQTVDQIIADVRQHGDDHVLKLTQQFDRHPAHQFSDLELSQQQLKAAFDGLNQEIREALQLAADRIRTFHEAQKQDSWTYVDDLGNTLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAHVAGVPEIIMVVPAPNGELNPLVLAAAYLAGVSRVFTIGGAQAVAALAYGTQTVPRVDKITGPGNRFVAAAKRAVFGQLGIDMIAGPSEILVYAEGVNNAEWLAMDVLSQAEHDTVAQAIFITPDGALLEAVESAIEKHLNELPKAEIARTSIENRGALVLVKDRAEAVDLINQVAPEHLELCLDDAEAMSQDIRHAGAIFMGRYTPEAIGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIMCSKDGVKTLAKTADVLAVQENLDAHARSARYRYQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HSO_A_11(1KAE)
HISX_ECOLI
[Raw transfer]




HIS_A_5(1KAH)
HISX_ECOLI
[Raw transfer]




0VD_A_6(4G09)
HISX_BRUSU
[Raw transfer]




0VD_A_6(4G09)
HISX_BRUSU
[Raw transfer]




HSM_A_5(1KAR)
HISX_ECOLI
[Raw transfer]




NAD_A_12(1KAE)
HISX_ECOLI
[Raw transfer]




NAD_A_12(1KAE)
HISX_ECOLI
[Raw transfer]




HSM_B_6(1KAR)
HISX_ECOLI
[Raw transfer]




1 PsiBlast_PDB 94.3859%-120 - C4 -4GIC - HISX_METCA -
15 HHSearch 93.7661%-122 - C4 -4GIC - HISX_METCA -
13 HHSearch 89.7150%-113 - C4 -4G09 4.6 HISX_BRUSU
3 PsiBlast_PDB 89.0950%-112 - C4 -4G09 4.6 HISX_BRUSU
2 PsiBlast_PDB 87.5050%-112 - C4 -4G07 - HISX_BRUSU -
4 PsiBlast_PDB 78.0340% -72 - C4 -1K75 - HISX_ECOLI -
5 PsiBlast_PDB 77.0240% -70 - C4 -1KAE 8.8 HISX_ECOLI
7 PsiBlast_PDB 76.8240% -68 - C4 -1KAR 2.9 HISX_ECOLI
6 PsiBlast_PDB 76.7240% -68 - C4 -1KAH 3.3 HISX_ECOLI
14 HHSearch 73.9339% -6 - C4 -1KAE 8.8 HISX_ECOLI
33 Fugue 72.5539% -3 - C4 -1K75 - HISX_ECOLI -
35 Fugue 38.2521% -57 * C1 *4K7J - ? -
30 HHSearch 36.6318%-162 - C4 -5J7I - ? -
20 HHSearch 36.1611%-137 - C4 -5VBF - ? -
32 HHSearch 32.7119%-129 - C4 -3K9D - ? -
10 PsiBlast_PDB 31.5429% -72 * C2 *3T90 - GNA1_ARATH -
37 Fugue 30.2515% -8 - C4 -1AD3 - AL3A1_RAT -
36 Fugue 29.9612% -15 - C4 -1EZ0 - ALDH_VIBHA -
34 Fugue 29.4422% 14 - C1 -4ZLA - AMPA_HELPY -
17 HHSearch 25.7415% -17 * C4 *2H5G - P5CS_HUMAN -